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Cluster: CGMR073586_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_47603 k141_47603_8 7859 9418 + 2.A.50.2.1
CAZyme k141_47603 k141_47603_9 9544 12147 - GH2
TC k141_47603 k141_47603_10 12235 14139 - 4.C.1.1.14
pfam k141_47603 k141_47603_11 14147 17527 - DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter
CAZyme k141_47603 k141_47603_12 17615 18373 + GT2
STP k141_47603 k141_47603_13 18435 19553 - HATPase_c | HisKA | Response_reg
CAZyme k141_47603 k141_47603_14 19754 22204 + GH51_2
CAZyme k141_47603 k141_47603_15 22350 24698 - GH20
Gene ID: k141_47603_8
Type: TC
Location: 7859 - 9418 (+)
Gene ID: k141_47603_9
Type: CAZyme
Location: 9544 - 12147 (-)
Gene ID: k141_47603_10
Type: TC
Location: 12235 - 14139 (-)
Gene ID: k141_47603_11
Type: pfam
Location: 14147 - 17527 (-)
Gene ID: k141_47603_12
Type: CAZyme
Location: 17615 - 18373 (+)
Gene ID: k141_47603_13
Type: STP
Location: 18435 - 19553 (-)
Gene ID: k141_47603_14
Type: CAZyme
Location: 19754 - 22204 (+)
Gene ID: k141_47603_15
Type: CAZyme
Location: 22350 - 24698 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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