Cluster: CGMR073586_CGC57
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR073586
- CGC Family ID: CGCFAM_01259
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_6542 | k141_6542_11 | 10278 | 11339 | + | GT4 |
| NULL(UNKNOWN) | k141_6542 | k141_6542_12 | 11336 | 12544 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_6542 | k141_6542_13 | 12534 | 13241 | + | GT26 |
| pfam | k141_6542 | k141_6542_14 | 13253 | 14413 | + | Epimerase_2 |
| TC | k141_6542 | k141_6542_15 | 14410 | 16854 | + | 1.B.18.1.2 |
Gene ID: k141_6542_11
Type: CAZyme
Location: 10278 - 11339 (+)
Type: CAZyme
Location: 10278 - 11339 (+)
Gene ID: k141_6542_12
Type:
Location: 11336 - 12544 (+)
Type:
Location: 11336 - 12544 (+)
Gene ID: k141_6542_13
Type: CAZyme
Location: 12534 - 13241 (+)
Type: CAZyme
Location: 12534 - 13241 (+)
Gene ID: k141_6542_14
Type: pfam
Location: 13253 - 14413 (+)
Type: pfam
Location: 13253 - 14413 (+)
Gene ID: k141_6542_15
Type: TC
Location: 14410 - 16854 (+)
Type: TC
Location: 14410 - 16854 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides johnsonii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_6542_13 | vegetarian > omnivore | 1.29168 | 0.00085 |