Cluster: CGMR073586_CGC18
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR073586
- CGC Family ID: CGCFAM_01021
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_97665 | k141_97665_8 | 5883 | 9260 | - | GH2 |
| pfam | k141_97665 | k141_97665_9 | 9353 | 9907 | - | DUF3332 |
| pfam | k141_97665 | k141_97665_10 | 10128 | 11909 | - | SusD_RagB | SusD-like_3 |
| TC | k141_97665 | k141_97665_11 | 11922 | 15026 | - | 1.B.14.6.1 |
| TC | k141_97665 | k141_97665_12 | 16105 | 19200 | + | 1.B.14.6.1 |
| pfam | k141_97665 | k141_97665_13 | 19230 | 20843 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_97665 | k141_97665_14 | 21029 | 22306 | + | CE15 |
| CAZyme | k141_97665 | k141_97665_15 | 22465 | 25383 | + | GH2 |
| CAZyme | k141_97665 | k141_97665_16 | 25435 | 26457 | + | GH159 |
| sulfatase | k141_97665 | k141_97665_17 | 26481 | 27866 | + | S1_19 |
| TC | k141_97665 | k141_97665_18 | 27944 | 29890 | + | 3.A.1.121.4 |
| NULL(UNKNOWN) | k141_97665 | k141_97665_19 | 30008 | 30130 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_97665 | k141_97665_20 | 30244 | 31410 | + | CE9 |
| CAZyme | k141_97665 | k141_97665_21 | 31429 | 32589 | + | CE9 |
Gene ID: k141_97665_8
Type: CAZyme
Location: 5883 - 9260 (-)
Type: CAZyme
Location: 5883 - 9260 (-)
Gene ID: k141_97665_9
Type: pfam
Location: 9353 - 9907 (-)
Type: pfam
Location: 9353 - 9907 (-)
Gene ID: k141_97665_10
Type: pfam
Location: 10128 - 11909 (-)
Type: pfam
Location: 10128 - 11909 (-)
Gene ID: k141_97665_11
Type: TC
Location: 11922 - 15026 (-)
Type: TC
Location: 11922 - 15026 (-)
Gene ID: k141_97665_12
Type: TC
Location: 16105 - 19200 (+)
Type: TC
Location: 16105 - 19200 (+)
Gene ID: k141_97665_13
Type: pfam
Location: 19230 - 20843 (+)
Type: pfam
Location: 19230 - 20843 (+)
Gene ID: k141_97665_14
Type: CAZyme
Location: 21029 - 22306 (+)
Type: CAZyme
Location: 21029 - 22306 (+)
Gene ID: k141_97665_15
Type: CAZyme
Location: 22465 - 25383 (+)
Type: CAZyme
Location: 22465 - 25383 (+)
Gene ID: k141_97665_16
Type: CAZyme
Location: 25435 - 26457 (+)
Type: CAZyme
Location: 25435 - 26457 (+)
Gene ID: k141_97665_17
Type: sulfatase
Location: 26481 - 27866 (+)
Type: sulfatase
Location: 26481 - 27866 (+)
Gene ID: k141_97665_18
Type: TC
Location: 27944 - 29890 (+)
Type: TC
Location: 27944 - 29890 (+)
Gene ID: k141_97665_19
Type:
Location: 30008 - 30130 (-)
Type:
Location: 30008 - 30130 (-)
Gene ID: k141_97665_20
Type: CAZyme
Location: 30244 - 31410 (+)
Type: CAZyme
Location: 30244 - 31410 (+)
Gene ID: k141_97665_21
Type: CAZyme
Location: 31429 - 32589 (+)
Type: CAZyme
Location: 31429 - 32589 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides johnsonii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_97665_19 | vegetarian > vegan | 1.09129 | 0.01155 |