Genome Details
Selected Rep_genome_ID: CGMR061816
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp944386445
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR061816 | 4,141,904 | 96.28% | 3.19% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR061816_CGC17 | CGCFAM_00026 | Yes | 4 | 2 | |
| CGMR061816_CGC5 | CGCFAM_00026 | Yes | 5 | 2 | |
| CGMR061816_CGC24 | CGCFAM_00035 | Yes | 5 | 1 | fructan |
| CGMR061816_CGC9 | CGCFAM_00141 | Yes | 8 | 2 | |
| CGMR061816_CGC11 | CGCFAM_00196 | Yes | 4 | 1 | |
| CGMR061816_CGC23 | CGCFAM_00694 | Yes | 4 | 1 | |
| CGMR061816_CGC30 | CGCFAM_00810 | Yes | 4 | 1 | |
| CGMR061816_CGC38 | CGCFAM_00831 | Yes | 4 | 1 | |
| CGMR061816_CGC34 | CGCFAM_01260 | Yes | 3 | 1 | |
| CGMR061816_CGC12 | CGCFAM_01556 | Yes | 6 | 1 | |
| CGMR061816_CGC44 | CGCFAM_01625 | Yes | 3 | 2 | |
| CGMR061816_CGC40 | CGCFAM_02393 | Yes | 3 | 1 | |
| CGMR061816_CGC2 | CGCFAM_03223 | Yes | 6 | 3 | |
| CGMR061816_CGC3 | CGCFAM_03349 | Yes | 7 | 1 | |
| CGMR061816_CGC29 | CGCFAM_03427 | Yes | 3 | 1 | |
| CGMR061816_CGC42 | CGCFAM_03632 | Yes | 6 | 1 | |
| CGMR061816_CGC35 | CGCFAM_04689 | Yes | 6 | 2 | |
| CGMR061816_CGC19 | CGCFAM_05696 | Yes | 11 | 3 | |
| CGMR061816_CGC25 | CGCFAM_05697 | Yes | 13 | 4 | |
| CGMR061816_CGC37 | CGCFAM_05698 | Yes | 3 | 1 | |
| CGMR061816_CGC13 | CGCFAM_08307 | Yes | 3 | 1 |
Top CAZyme Families