Cluster: CGMR061816_CGC42
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061816
- CGC Family ID: CGCFAM_03632
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6669 | k141_6669_30 | 28845 | 30647 | + | 8.A.59.2.1 |
| TC | k141_6669 | k141_6669_31 | 30853 | 31809 | + | 3.A.1.1.29 |
| TC | k141_6669 | k141_6669_32 | 31819 | 32730 | + | 3.A.1.1.29 |
| STP | k141_6669 | k141_6669_33 | 32763 | 34343 | + | SBP_bac_1 |
| pfam | k141_6669 | k141_6669_34 | 34419 | 35213 | - | AP_endonuc_2 |
| CAZyme | k141_6669 | k141_6669_35 | 35271 | 36380 | - | GH179 |
Gene ID: k141_6669_30
Type: TC
Location: 28845 - 30647 (+)
Type: TC
Location: 28845 - 30647 (+)
Gene ID: k141_6669_31
Type: TC
Location: 30853 - 31809 (+)
Type: TC
Location: 30853 - 31809 (+)
Gene ID: k141_6669_32
Type: TC
Location: 31819 - 32730 (+)
Type: TC
Location: 31819 - 32730 (+)
Gene ID: k141_6669_33
Type: STP
Location: 32763 - 34343 (+)
Type: STP
Location: 32763 - 34343 (+)
Gene ID: k141_6669_34
Type: pfam
Location: 34419 - 35213 (-)
Type: pfam
Location: 34419 - 35213 (-)
Gene ID: k141_6669_35
Type: CAZyme
Location: 35271 - 36380 (-)
Type: CAZyme
Location: 35271 - 36380 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp944386445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.