Cluster: CGMR061816_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061816
- CGC Family ID: CGCFAM_01556
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_102447 | k141_102447_28 | 25759 | 27594 | + | 8.A.59.2.1 |
| TC | k141_102447 | k141_102447_29 | 27817 | 28743 | + | 3.A.1.1.29 |
| TC | k141_102447 | k141_102447_30 | 28767 | 29693 | + | 3.A.1.1.29 |
| STP | k141_102447 | k141_102447_31 | 29775 | 31373 | + | SBP_bac_1 |
| STP | k141_102447 | k141_102447_32 | 31459 | 33471 | + | TPR_2 |
| CAZyme | k141_102447 | k141_102447_33 | 33522 | 35621 | + | GH78 |
Gene ID: k141_102447_28
Type: TC
Location: 25759 - 27594 (+)
Type: TC
Location: 25759 - 27594 (+)
Gene ID: k141_102447_29
Type: TC
Location: 27817 - 28743 (+)
Type: TC
Location: 27817 - 28743 (+)
Gene ID: k141_102447_30
Type: TC
Location: 28767 - 29693 (+)
Type: TC
Location: 28767 - 29693 (+)
Gene ID: k141_102447_31
Type: STP
Location: 29775 - 31373 (+)
Type: STP
Location: 29775 - 31373 (+)
Gene ID: k141_102447_32
Type: STP
Location: 31459 - 33471 (+)
Type: STP
Location: 31459 - 33471 (+)
Gene ID: k141_102447_33
Type: CAZyme
Location: 33522 - 35621 (+)
Type: CAZyme
Location: 33522 - 35621 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp944386445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.