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Cluster: CGMR061816_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_181008 k141_181008_71 81990 83363 - GH39
CAZyme k141_181008 k141_181008_72 83572 84741 - GH177
pfam k141_181008 k141_181008_73 84759 85520 - AP_endonuc_2
STP k141_181008 k141_181008_74 86411 88456 + SBP_bac_5
TC k141_181008 k141_181008_75 88668 89645 + 3.A.1.5.20
TC k141_181008 k141_181008_76 89662 90726 + 3.A.1.5.20
TC k141_181008 k141_181008_77 90736 91884 + 3.A.1.5.20
TC k141_181008 k141_181008_78 91889 92902 + 3.A.1.5.20
CAZyme k141_181008 k141_181008_79 93026 94351 - GH39
STP k141_181008 k141_181008_80 94506 95081 - Nitroreductase
TC k141_181008 k141_181008_81 95084 96367 - 2.A.86.1.8
Gene ID: k141_181008_71
Type: CAZyme
Location: 81990 - 83363 (-)
Gene ID: k141_181008_72
Type: CAZyme
Location: 83572 - 84741 (-)
Gene ID: k141_181008_73
Type: pfam
Location: 84759 - 85520 (-)
Gene ID: k141_181008_74
Type: STP
Location: 86411 - 88456 (+)
Gene ID: k141_181008_75
Type: TC
Location: 88668 - 89645 (+)
Gene ID: k141_181008_76
Type: TC
Location: 89662 - 90726 (+)
Gene ID: k141_181008_77
Type: TC
Location: 90736 - 91884 (+)
Gene ID: k141_181008_78
Type: TC
Location: 91889 - 92902 (+)
Gene ID: k141_181008_79
Type: CAZyme
Location: 93026 - 94351 (-)
Gene ID: k141_181008_80
Type: STP
Location: 94506 - 95081 (-)
Gene ID: k141_181008_81
Type: TC
Location: 95084 - 96367 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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