Cluster: CGMR061816_CGC9
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR061816
- CGC Family ID: CGCFAM_00141
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_36480 | k141_36480_13 | 12882 | 15428 | + | CBM67 | GH78 |
| STP | k141_36480 | k141_36480_14 | 15675 | 16934 | - | Pyr_redox_2 |
| TF | k141_36480 | k141_36480_15 | 17077 | 17952 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_36480 | k141_36480_16 | 18074 | 20029 | + | GH78 |
| TF | k141_36480 | k141_36480_17 | 20150 | 22294 | - | HTH_AraC |
| TC | k141_36480 | k141_36480_18 | 22371 | 24122 | - | 3.A.1.1.10 |
| TC | k141_36480 | k141_36480_19 | 24192 | 25109 | - | 3.A.1.1.10 |
| TC | k141_36480 | k141_36480_20 | 25119 | 26069 | - | 3.A.1.1.10 |
Gene ID: k141_36480_13
Type: CAZyme
Location: 12882 - 15428 (+)
Type: CAZyme
Location: 12882 - 15428 (+)
Gene ID: k141_36480_14
Type: STP
Location: 15675 - 16934 (-)
Type: STP
Location: 15675 - 16934 (-)
Gene ID: k141_36480_15
Type: TF
Location: 17077 - 17952 (+)
Type: TF
Location: 17077 - 17952 (+)
Gene ID: k141_36480_16
Type: CAZyme
Location: 18074 - 20029 (+)
Type: CAZyme
Location: 18074 - 20029 (+)
Gene ID: k141_36480_17
Type: TF
Location: 20150 - 22294 (-)
Type: TF
Location: 20150 - 22294 (-)
Gene ID: k141_36480_18
Type: TC
Location: 22371 - 24122 (-)
Type: TC
Location: 22371 - 24122 (-)
Gene ID: k141_36480_19
Type: TC
Location: 24192 - 25109 (-)
Type: TC
Location: 24192 - 25109 (-)
Gene ID: k141_36480_20
Type: TC
Location: 25119 - 26069 (-)
Type: TC
Location: 25119 - 26069 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp944386445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.