Cluster: CGMR061816_CGC35
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR061816
- CGC Family ID: CGCFAM_04689
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_13778 | k141_13778_12 | 11967 | 12872 | + | 3.A.1.1.10 |
| TC | k141_13778 | k141_13778_13 | 12884 | 13792 | + | 3.A.1.1.10 |
| CAZyme | k141_13778 | k141_13778_14 | 13797 | 14939 | + | CE9 |
| pfam | k141_13778 | k141_13778_15 | 14936 | 15823 | + | ROK |
| pfam | k141_13778 | k141_13778_16 | 15828 | 16163 | + | MazG |
| CAZyme | k141_13778 | k141_13778_17 | 16177 | 17931 | + | GH123 |
Gene ID: k141_13778_12
Type: TC
Location: 11967 - 12872 (+)
Type: TC
Location: 11967 - 12872 (+)
Gene ID: k141_13778_13
Type: TC
Location: 12884 - 13792 (+)
Type: TC
Location: 12884 - 13792 (+)
Gene ID: k141_13778_14
Type: CAZyme
Location: 13797 - 14939 (+)
Type: CAZyme
Location: 13797 - 14939 (+)
Gene ID: k141_13778_15
Type: pfam
Location: 14936 - 15823 (+)
Type: pfam
Location: 14936 - 15823 (+)
Gene ID: k141_13778_16
Type: pfam
Location: 15828 - 16163 (+)
Type: pfam
Location: 15828 - 16163 (+)
Gene ID: k141_13778_17
Type: CAZyme
Location: 16177 - 17931 (+)
Type: CAZyme
Location: 16177 - 17931 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp944386445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.