Cluster: CGMR061816_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061816
- CGC Family ID: CGCFAM_03349
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_69528 | k141_69528_16 | 18698 | 19378 | + | 2.A.88.3.1 |
| pfam | k141_69528 | k141_69528_17 | 19495 | 20631 | + | Metallophos | SbcD_C | Metallophos_2 |
| pfam | k141_69528 | k141_69528_18 | 20628 | 23399 | + | AAA_23 | AAA_27 | AAA_29 | SbcC_Walker_B |
| TC | k141_69528 | k141_69528_19 | 23465 | 24544 | - | 1.A.23.4.2 |
| NULL(UNKNOWN) | k141_69528 | k141_69528_20 | 24629 | 24787 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_69528 | k141_69528_21 | 24784 | 25626 | - | HTH_AraC | HTH_AraC |
| CAZyme | k141_69528 | k141_69528_22 | 25791 | 27098 | + | GH4 |
Gene ID: k141_69528_16
Type: TC
Location: 18698 - 19378 (+)
Type: TC
Location: 18698 - 19378 (+)
Gene ID: k141_69528_17
Type: pfam
Location: 19495 - 20631 (+)
Type: pfam
Location: 19495 - 20631 (+)
Gene ID: k141_69528_18
Type: pfam
Location: 20628 - 23399 (+)
Type: pfam
Location: 20628 - 23399 (+)
Gene ID: k141_69528_19
Type: TC
Location: 23465 - 24544 (-)
Type: TC
Location: 23465 - 24544 (-)
Gene ID: k141_69528_20
Type:
Location: 24629 - 24787 (+)
Type:
Location: 24629 - 24787 (+)
Gene ID: k141_69528_21
Type: TF
Location: 24784 - 25626 (-)
Type: TF
Location: 24784 - 25626 (-)
Gene ID: k141_69528_22
Type: CAZyme
Location: 25791 - 27098 (+)
Type: CAZyme
Location: 25791 - 27098 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp944386445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.