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Genome Details

Selected Rep_genome_ID: B41.bin_1
Total Genomes Found: 15
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Tannerellaceae
→
Genus
Parabacteroides
→
Species
Parabacteroides merdae
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG283_bin.30 4,060,098 99.62% 0% NA Africa H3AfricaPhase2
B41.bin_1 4,293,497 99.62% 0% China(Inner Mongolia) Asia IMGG
Rep_565 4,297,454 99.4231% 0% NA NA WIS
SPMP01_bin.36 3,868,497 95.53% 0.58% Singapore Asia SPMP
SPMP06_bin.117 4,157,400 90.06% 1.47% Singapore Asia SPMP
SPMP106_bin.95 4,077,036 94.42% 1.15% Singapore Asia SPMP
SPMP22_bin.34 4,339,365 96.5% 1.35% Singapore Asia SPMP
SPMP23_bin.85 3,982,974 96.35% 0.74% Singapore Asia SPMP
SPMP39_bin.37 4,342,837 97.31% 0.19% Singapore Asia SPMP
SPMP40_bin.130 4,201,690 97.34% 0.38% Singapore Asia SPMP
SPMP61_bin.74 4,082,700 92.26% 0.13% Singapore Asia SPMP
SPMP63_bin.58 4,343,857 98.25% 0.01% Singapore Asia SPMP
SPMP65_bin.63 4,423,189 96.92% 0.58% Singapore Asia SPMP
SPMP67_bin.10 3,909,107 91.14% 2.5% Singapore Asia SPMP
SPMP89_bin.106 3,936,274 94.86% 1.56% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
B41.bin_1_CGC40 CGCFAM_01288 Yes 6 3
B41.bin_1_CGC66 CGCFAM_01378 Yes 5 3
B41.bin_1_CGC57 CGCFAM_01403 Yes 6 1
B41.bin_1_CGC8 CGCFAM_01404 Yes 14 4
B41.bin_1_CGC53 CGCFAM_01655 Yes 5 2
B41.bin_1_CGC23 CGCFAM_02030 Yes 5 2
B41.bin_1_CGC32 CGCFAM_02082 Yes 11 6
B41.bin_1_CGC50 CGCFAM_02083 Yes 4 1
B41.bin_1_CGC30 CGCFAM_02540 Yes 4 1
B41.bin_1_CGC39 CGCFAM_02567 Yes 7 2
B41.bin_1_CGC20 CGCFAM_02611 Yes 3 1
B41.bin_1_CGC6 CGCFAM_02612 Yes 9 1
B41.bin_1_CGC62 CGCFAM_02613 Yes 5 2
B41.bin_1_CGC51 CGCFAM_02930 Yes 3 1
B41.bin_1_CGC9 CGCFAM_03315 Yes 5 1
B41.bin_1_CGC28 CGCFAM_03437 Yes 6 1
B41.bin_1_CGC33 CGCFAM_03438 Yes 6 2
B41.bin_1_CGC42 CGCFAM_03439 Yes 5 2
B41.bin_1_CGC7 CGCFAM_03441 Yes 12 2
B41.bin_1_CGC22 CGCFAM_04160 Yes 8 2 host glycan
B41.bin_1_CGC58 CGCFAM_04728 Yes 4 1
B41.bin_1_CGC29 CGCFAM_04942 Yes 5 2
B41.bin_1_CGC69 CGCFAM_04944 Yes 3 1
B41.bin_1_CGC26 CGCFAM_06499 Yes 4 1
B41.bin_1_CGC19 CGCFAM_07490 Yes 14 4
Top CAZyme Families