Cluster: B41.bin_1_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: B41.bin_1
- CGC Family ID: CGCFAM_03438
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B41_contig_445 | B41_contig_445_1090 | 1389414 | 1391069 | + | 4.C.1.1.7 |
| pfam | B41_contig_445 | B41_contig_445_1091 | 1391159 | 1392532 | + | AdoHcyase_NAD | 2-Hacid_dh_C | AdoHcyase | KARI_N |
| pfam | B41_contig_445 | B41_contig_445_1092 | 1392598 | 1393371 | + | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | B41_contig_445 | B41_contig_445_1093 | 1393374 | 1394372 | + | GT2 |
| TC | B41_contig_445 | B41_contig_445_1094 | 1394498 | 1397017 | - | 9.B.144.1.4 |
| CAZyme | B41_contig_445 | B41_contig_445_1095 | 1397044 | 1397805 | - | GT2 |
Gene ID: B41_contig_445_1090
Type: TC
Location: 1389414 - 1391069 (+)
Type: TC
Location: 1389414 - 1391069 (+)
Gene ID: B41_contig_445_1091
Type: pfam
Location: 1391159 - 1392532 (+)
Type: pfam
Location: 1391159 - 1392532 (+)
Gene ID: B41_contig_445_1092
Type: pfam
Location: 1392598 - 1393371 (+)
Type: pfam
Location: 1392598 - 1393371 (+)
Gene ID: B41_contig_445_1093
Type: CAZyme
Location: 1393374 - 1394372 (+)
Type: CAZyme
Location: 1393374 - 1394372 (+)
Gene ID: B41_contig_445_1094
Type: TC
Location: 1394498 - 1397017 (-)
Type: TC
Location: 1394498 - 1397017 (-)
Gene ID: B41_contig_445_1095
Type: CAZyme
Location: 1397044 - 1397805 (-)
Type: CAZyme
Location: 1397044 - 1397805 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.