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Genome Details

Selected Rep_genome_ID: B41.bin_1
Total Genomes Found: 15
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Tannerellaceae
→
Genus
Parabacteroides
→
Species
Parabacteroides merdae
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG283_bin.30 4,060,098 99.62% 0% NA Africa H3AfricaPhase2
B41.bin_1 4,293,497 99.62% 0% China(Inner Mongolia) Asia IMGG
Rep_565 4,297,454 99.4231% 0% NA NA WIS
SPMP01_bin.36 3,868,497 95.53% 0.58% Singapore Asia SPMP
SPMP06_bin.117 4,157,400 90.06% 1.47% Singapore Asia SPMP
SPMP106_bin.95 4,077,036 94.42% 1.15% Singapore Asia SPMP
SPMP22_bin.34 4,339,365 96.5% 1.35% Singapore Asia SPMP
SPMP23_bin.85 3,982,974 96.35% 0.74% Singapore Asia SPMP
SPMP39_bin.37 4,342,837 97.31% 0.19% Singapore Asia SPMP
SPMP40_bin.130 4,201,690 97.34% 0.38% Singapore Asia SPMP
SPMP61_bin.74 4,082,700 92.26% 0.13% Singapore Asia SPMP
SPMP63_bin.58 4,343,857 98.25% 0.01% Singapore Asia SPMP
SPMP65_bin.63 4,423,189 96.92% 0.58% Singapore Asia SPMP
SPMP67_bin.10 3,909,107 91.14% 2.5% Singapore Asia SPMP
SPMP89_bin.106 3,936,274 94.86% 1.56% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
B41.bin_1_CGC11 CGCFAM_00001 Yes 6 4 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
B41.bin_1_CGC24 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
B41.bin_1_CGC25 CGCFAM_00001 Yes 8 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
B41.bin_1_CGC41 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
B41.bin_1_CGC67 CGCFAM_00005 Yes 3 2
B41.bin_1_CGC12 CGCFAM_00007 Yes 9 3
B41.bin_1_CGC37 CGCFAM_00030 Yes 4 2
B41.bin_1_CGC17 CGCFAM_00061 Yes 5 2
B41.bin_1_CGC56 CGCFAM_00109 Yes 5 3 host glycan
B41.bin_1_CGC64 CGCFAM_00143 Yes 3 1
B41.bin_1_CGC15 CGCFAM_00274 Yes 6 3
B41.bin_1_CGC4 CGCFAM_00310 Yes 3 1
B41.bin_1_CGC44 CGCFAM_00388 Yes 3 1
B41.bin_1_CGC47 CGCFAM_00388 Yes 3 1
B41.bin_1_CGC27 CGCFAM_00404 Yes 8 2
B41.bin_1_CGC38 CGCFAM_00480 Yes 4 3 pectin/host glycan
B41.bin_1_CGC48 CGCFAM_00519 Yes 5 2
B41.bin_1_CGC1 CGCFAM_00760 Yes 3 1
B41.bin_1_CGC71 CGCFAM_00792 Yes 5 2
B41.bin_1_CGC16 CGCFAM_00829 Yes 9 5
B41.bin_1_CGC10 CGCFAM_00968 Yes 12 4
B41.bin_1_CGC14 CGCFAM_01021 Yes 12 5
B41.bin_1_CGC52 CGCFAM_01173 Yes 13 5
B41.bin_1_CGC54 CGCFAM_01199 Yes 3 2
B41.bin_1_CGC45 CGCFAM_01287 Yes 3 1
Top CAZyme Families