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Cluster: B41.bin_1_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B41_contig_445 B41_contig_445_478 590215 593442 + 1.B.14.6.1
pfam B41_contig_445 B41_contig_445_479 593459 595072 + SusD_RagB | SusD-like_2 | SusD-like_3
CAZyme B41_contig_445 B41_contig_445_480 595137 596693 + GH142
CAZyme B41_contig_445 B41_contig_445_481 596711 598564 + GH127
CAZyme B41_contig_445 B41_contig_445_482 598585 600624 + GH146
TF B41_contig_445 B41_contig_445_483 600820 604773 + HTH_AraC
CAZyme B41_contig_445 B41_contig_445_484 604804 606822 - GH127
NULL(UNKNOWN) B41_contig_445 B41_contig_445_485 606986 607216 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme B41_contig_445 B41_contig_445_486 607219 608541 - GH177
Gene ID: B41_contig_445_478
Type: TC
Location: 590215 - 593442 (+)
Gene ID: B41_contig_445_479
Type: pfam
Location: 593459 - 595072 (+)
Gene ID: B41_contig_445_480
Type: CAZyme
Location: 595137 - 596693 (+)
Gene ID: B41_contig_445_481
Type: CAZyme
Location: 596711 - 598564 (+)
Gene ID: B41_contig_445_482
Type: CAZyme
Location: 598585 - 600624 (+)
Gene ID: B41_contig_445_483
Type: TF
Location: 600820 - 604773 (+)
Gene ID: B41_contig_445_484
Type: CAZyme
Location: 604804 - 606822 (-)
Gene ID: B41_contig_445_485
Type:
Location: 606986 - 607216 (-)
Gene ID: B41_contig_445_486
Type: CAZyme
Location: 607219 - 608541 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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