Cluster: B41.bin_1_CGC52
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: B41.bin_1
- CGC Family ID: CGCFAM_01173
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B41_contig_445 | B41_contig_445_1912 | 2420117 | 2421892 | - | GH123 |
| pfam | B41_contig_445 | B41_contig_445_1913 | 2422002 | 2423075 | - | Radical_SAM | SPASM |
| NULL(UNKNOWN) | B41_contig_445 | B41_contig_445_1914 | 2423072 | 2423548 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B41_contig_445 | B41_contig_445_1915 | 2423843 | 2425690 | + | 3.A.1.135.5 |
| CAZyme | B41_contig_445 | B41_contig_445_1916 | 2425737 | 2426831 | + | GH5_38 |
| CAZyme | B41_contig_445 | B41_contig_445_1917 | 2426840 | 2429269 | + | GH95 |
| pfam | B41_contig_445 | B41_contig_445_1918 | 2429270 | 2430472 | - | Porin_O_P |
| pfam | B41_contig_445 | B41_contig_445_1919 | 2430512 | 2431189 | - | PhoU | PhoU |
| TC | B41_contig_445 | B41_contig_445_1920 | 2431291 | 2432043 | - | 3.A.1.7.1 |
| TC | B41_contig_445 | B41_contig_445_1921 | 2432057 | 2432944 | - | 3.A.1.7.2 |
| TC | B41_contig_445 | B41_contig_445_1922 | 2432953 | 2434335 | - | 3.A.1.7.5 |
| CAZyme | B41_contig_445 | B41_contig_445_1923 | 2434776 | 2435972 | + | GH88 |
| CAZyme | B41_contig_445 | B41_contig_445_1924 | 2435982 | 2437199 | + | GH154 |
Gene ID: B41_contig_445_1912
Type: CAZyme
Location: 2420117 - 2421892 (-)
Type: CAZyme
Location: 2420117 - 2421892 (-)
Gene ID: B41_contig_445_1913
Type: pfam
Location: 2422002 - 2423075 (-)
Type: pfam
Location: 2422002 - 2423075 (-)
Gene ID: B41_contig_445_1914
Type:
Location: 2423072 - 2423548 (-)
Type:
Location: 2423072 - 2423548 (-)
Gene ID: B41_contig_445_1915
Type: TC
Location: 2423843 - 2425690 (+)
Type: TC
Location: 2423843 - 2425690 (+)
Gene ID: B41_contig_445_1916
Type: CAZyme
Location: 2425737 - 2426831 (+)
Type: CAZyme
Location: 2425737 - 2426831 (+)
Gene ID: B41_contig_445_1917
Type: CAZyme
Location: 2426840 - 2429269 (+)
Type: CAZyme
Location: 2426840 - 2429269 (+)
Gene ID: B41_contig_445_1918
Type: pfam
Location: 2429270 - 2430472 (-)
Type: pfam
Location: 2429270 - 2430472 (-)
Gene ID: B41_contig_445_1919
Type: pfam
Location: 2430512 - 2431189 (-)
Type: pfam
Location: 2430512 - 2431189 (-)
Gene ID: B41_contig_445_1920
Type: TC
Location: 2431291 - 2432043 (-)
Type: TC
Location: 2431291 - 2432043 (-)
Gene ID: B41_contig_445_1921
Type: TC
Location: 2432057 - 2432944 (-)
Type: TC
Location: 2432057 - 2432944 (-)
Gene ID: B41_contig_445_1922
Type: TC
Location: 2432953 - 2434335 (-)
Type: TC
Location: 2432953 - 2434335 (-)
Gene ID: B41_contig_445_1923
Type: CAZyme
Location: 2434776 - 2435972 (+)
Type: CAZyme
Location: 2434776 - 2435972 (+)
Gene ID: B41_contig_445_1924
Type: CAZyme
Location: 2435982 - 2437199 (+)
Type: CAZyme
Location: 2435982 - 2437199 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.