Cluster: B41.bin_1_CGC10
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: B41.bin_1
- CGC Family ID: CGCFAM_00968
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B41_contig_445 | B41_contig_445_207 | 249820 | 250773 | + | GT2 |
| STP | B41_contig_445 | B41_contig_445_208 | 250770 | 251294 | + | Nitroreductase | Nitroreductase |
| TC | B41_contig_445 | B41_contig_445_209 | 251301 | 251867 | + | 2.A.107.1.2 |
| pfam | B41_contig_445 | B41_contig_445_210 | 252340 | 253650 | + | Metallophos |
| NULL(UNKNOWN) | B41_contig_445 | B41_contig_445_211 | 253777 | 254991 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B41_contig_445 | B41_contig_445_212 | 254988 | 256214 | + | GT4 |
| CAZyme | B41_contig_445 | B41_contig_445_213 | 256211 | 257305 | + | GT4 |
| NULL(UNKNOWN) | B41_contig_445 | B41_contig_445_214 | 257294 | 258286 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B41_contig_445 | B41_contig_445_215 | 258298 | 259479 | - | GT4 |
| pfam | B41_contig_445 | B41_contig_445_216 | 259489 | 260655 | - | Epimerase_2 |
| pfam | B41_contig_445 | B41_contig_445_217 | 260667 | 261458 | - | LicD |
| TC | B41_contig_445 | B41_contig_445_218 | 261445 | 262620 | - | 2.A.66.2.10 |
Gene ID: B41_contig_445_207
Type: CAZyme
Location: 249820 - 250773 (+)
Type: CAZyme
Location: 249820 - 250773 (+)
Gene ID: B41_contig_445_208
Type: STP
Location: 250770 - 251294 (+)
Type: STP
Location: 250770 - 251294 (+)
Gene ID: B41_contig_445_209
Type: TC
Location: 251301 - 251867 (+)
Type: TC
Location: 251301 - 251867 (+)
Gene ID: B41_contig_445_210
Type: pfam
Location: 252340 - 253650 (+)
Type: pfam
Location: 252340 - 253650 (+)
Gene ID: B41_contig_445_211
Type:
Location: 253777 - 254991 (+)
Type:
Location: 253777 - 254991 (+)
Gene ID: B41_contig_445_212
Type: CAZyme
Location: 254988 - 256214 (+)
Type: CAZyme
Location: 254988 - 256214 (+)
Gene ID: B41_contig_445_213
Type: CAZyme
Location: 256211 - 257305 (+)
Type: CAZyme
Location: 256211 - 257305 (+)
Gene ID: B41_contig_445_214
Type:
Location: 257294 - 258286 (-)
Type:
Location: 257294 - 258286 (-)
Gene ID: B41_contig_445_215
Type: CAZyme
Location: 258298 - 259479 (-)
Type: CAZyme
Location: 258298 - 259479 (-)
Gene ID: B41_contig_445_216
Type: pfam
Location: 259489 - 260655 (-)
Type: pfam
Location: 259489 - 260655 (-)
Gene ID: B41_contig_445_217
Type: pfam
Location: 260667 - 261458 (-)
Type: pfam
Location: 260667 - 261458 (-)
Gene ID: B41_contig_445_218
Type: TC
Location: 261445 - 262620 (-)
Type: TC
Location: 261445 - 262620 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B41_contig_445_208 | vegetarian > omnivore | 1.02783 | 0.00560 |
| B41_contig_445_217 | vegetarian > omnivore | 1.14867 | 0.00560 |
| B41_contig_445_218 | vegetarian > omnivore | 1.14384 | 0.00560 |