Cluster: B41.bin_1_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: B41.bin_1
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B41_contig_445 | B41_contig_445_772 | 968856 | 970184 | - | CBM32 |
| pfam | B41_contig_445 | B41_contig_445_773 | 970202 | 972208 | - | SusD_RagB | SusD-like_3 |
| TC | B41_contig_445 | B41_contig_445_774 | 972236 | 975394 | - | 1.B.14.6.1 |
Gene ID: B41_contig_445_772
Type: CAZyme
Location: 968856 - 970184 (-)
Type: CAZyme
Location: 968856 - 970184 (-)
Gene ID: B41_contig_445_773
Type: pfam
Location: 970202 - 972208 (-)
Type: pfam
Location: 970202 - 972208 (-)
Gene ID: B41_contig_445_774
Type: TC
Location: 972236 - 975394 (-)
Type: TC
Location: 972236 - 975394 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B41_contig_445_773 | vegetarian > omnivore | 1.00467 | 0.00560 |