Cluster: B41.bin_1_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: B41.bin_1
- CGC Family ID: CGCFAM_02030
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B41_contig_445 | B41_contig_445_739 | 925286 | 928633 | + | 1.B.14.6.1 |
| TC | B41_contig_445 | B41_contig_445_740 | 928642 | 930492 | + | 8.A.46.1.5 |
| pfam | B41_contig_445 | B41_contig_445_741 | 930539 | 931210 | + | DUF3823 | DUF3823_C |
| CAZyme | B41_contig_445 | B41_contig_445_742 | 931273 | 932412 | + | GH130_3 |
| CAZyme | B41_contig_445 | B41_contig_445_743 | 932424 | 935114 | + | GH2 |
Gene ID: B41_contig_445_739
Type: TC
Location: 925286 - 928633 (+)
Type: TC
Location: 925286 - 928633 (+)
Gene ID: B41_contig_445_740
Type: TC
Location: 928642 - 930492 (+)
Type: TC
Location: 928642 - 930492 (+)
Gene ID: B41_contig_445_741
Type: pfam
Location: 930539 - 931210 (+)
Type: pfam
Location: 930539 - 931210 (+)
Gene ID: B41_contig_445_742
Type: CAZyme
Location: 931273 - 932412 (+)
Type: CAZyme
Location: 931273 - 932412 (+)
Gene ID: B41_contig_445_743
Type: CAZyme
Location: 932424 - 935114 (+)
Type: CAZyme
Location: 932424 - 935114 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B41_contig_445_740 | vegetarian > omnivore | 1.11064 | 0.00560 |
| B41_contig_445_741 | vegetarian > omnivore | 1.32639 | 0.00560 |