Cluster: B41.bin_1_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: B41.bin_1
- CGC Family ID: CGCFAM_03441
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B41_contig_581 | B41_contig_581_205 | 235814 | 237355 | + | 2.A.49.6.1 |
| TC | B41_contig_581 | B41_contig_581_206 | 238209 | 238895 | + | 2.A.88.8.1 |
| pfam | B41_contig_581 | B41_contig_581_207 | 238890 | 239522 | - | Hydrolase | HAD_2 |
| TC | B41_contig_581 | B41_contig_581_208 | 239576 | 240904 | - | 3.A.1.11.2 |
| TC | B41_contig_581 | B41_contig_581_209 | 240921 | 241709 | - | 3.A.1.11.8 |
| TC | B41_contig_581 | B41_contig_581_210 | 241706 | 242506 | - | 3.A.1.11.8 |
| TC | B41_contig_581 | B41_contig_581_211 | 242496 | 243902 | - | 3.A.1.11.8 |
| TC | B41_contig_581 | B41_contig_581_212 | 244011 | 245207 | - | 2.A.40.1.4 |
| CAZyme | B41_contig_581 | B41_contig_581_213 | 245418 | 247898 | - | GH2 |
| CAZyme | B41_contig_581 | B41_contig_581_214 | 247931 | 249139 | - | GH88 |
| TC | B41_contig_581 | B41_contig_581_215 | 249226 | 250707 | - | 8.A.46.1.3 |
| TC | B41_contig_581 | B41_contig_581_216 | 250733 | 253813 | - | 1.B.14.6.1 |
Gene ID: B41_contig_581_205
Type: TC
Location: 235814 - 237355 (+)
Type: TC
Location: 235814 - 237355 (+)
Gene ID: B41_contig_581_206
Type: TC
Location: 238209 - 238895 (+)
Type: TC
Location: 238209 - 238895 (+)
Gene ID: B41_contig_581_207
Type: pfam
Location: 238890 - 239522 (-)
Type: pfam
Location: 238890 - 239522 (-)
Gene ID: B41_contig_581_208
Type: TC
Location: 239576 - 240904 (-)
Type: TC
Location: 239576 - 240904 (-)
Gene ID: B41_contig_581_209
Type: TC
Location: 240921 - 241709 (-)
Type: TC
Location: 240921 - 241709 (-)
Gene ID: B41_contig_581_210
Type: TC
Location: 241706 - 242506 (-)
Type: TC
Location: 241706 - 242506 (-)
Gene ID: B41_contig_581_211
Type: TC
Location: 242496 - 243902 (-)
Type: TC
Location: 242496 - 243902 (-)
Gene ID: B41_contig_581_212
Type: TC
Location: 244011 - 245207 (-)
Type: TC
Location: 244011 - 245207 (-)
Gene ID: B41_contig_581_213
Type: CAZyme
Location: 245418 - 247898 (-)
Type: CAZyme
Location: 245418 - 247898 (-)
Gene ID: B41_contig_581_214
Type: CAZyme
Location: 247931 - 249139 (-)
Type: CAZyme
Location: 247931 - 249139 (-)
Gene ID: B41_contig_581_215
Type: TC
Location: 249226 - 250707 (-)
Type: TC
Location: 249226 - 250707 (-)
Gene ID: B41_contig_581_216
Type: TC
Location: 250733 - 253813 (-)
Type: TC
Location: 250733 - 253813 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.