Cluster: B41.bin_1_CGC40
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: B41.bin_1
- CGC Family ID: CGCFAM_01288
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B41_contig_445 | B41_contig_445_1463 | 1869093 | 1872572 | + | 1.B.14.6.1 |
| pfam | B41_contig_445 | B41_contig_445_1464 | 1872605 | 1874077 | + | SusD_RagB | SusD-like_3 |
| CAZyme | B41_contig_445 | B41_contig_445_1465 | 1874163 | 1875350 | + | GH16_24 |
| pfam | B41_contig_445 | B41_contig_445_1466 | 1875352 | 1876923 | + | DUF4832 | DUF4874 |
| CAZyme | B41_contig_445 | B41_contig_445_1467 | 1876920 | 1879076 | + | GH89 |
| CAZyme | B41_contig_445 | B41_contig_445_1468 | 1879098 | 1880693 | + | GH31_19 |
Gene ID: B41_contig_445_1463
Type: TC
Location: 1869093 - 1872572 (+)
Type: TC
Location: 1869093 - 1872572 (+)
Gene ID: B41_contig_445_1464
Type: pfam
Location: 1872605 - 1874077 (+)
Type: pfam
Location: 1872605 - 1874077 (+)
Gene ID: B41_contig_445_1465
Type: CAZyme
Location: 1874163 - 1875350 (+)
Type: CAZyme
Location: 1874163 - 1875350 (+)
Gene ID: B41_contig_445_1466
Type: pfam
Location: 1875352 - 1876923 (+)
Type: pfam
Location: 1875352 - 1876923 (+)
Gene ID: B41_contig_445_1467
Type: CAZyme
Location: 1876920 - 1879076 (+)
Type: CAZyme
Location: 1876920 - 1879076 (+)
Gene ID: B41_contig_445_1468
Type: CAZyme
Location: 1879098 - 1880693 (+)
Type: CAZyme
Location: 1879098 - 1880693 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.