Cluster: B41.bin_1_CGC19
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: B41.bin_1
- CGC Family ID: CGCFAM_07490
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B41_contig_445 | B41_contig_445_631 | 787580 | 789271 | - | GH13_38 |
| pfam | B41_contig_445 | B41_contig_445_632 | 789330 | 790169 | - | Patatin |
| TC | B41_contig_445 | B41_contig_445_633 | 790350 | 792554 | + | 3.A.10.1.10 |
| pfam | B41_contig_445 | B41_contig_445_634 | 793020 | 795212 | + | Gln-synt_C | GSIII_N | Gln-synt_C-ter |
| pfam | B41_contig_445 | B41_contig_445_635 | 795310 | 796470 | + | DUF4934 | DUF5128 |
| CAZyme | B41_contig_445 | B41_contig_445_636 | 796486 | 797457 | - | CBM32 |
| TF | B41_contig_445 | B41_contig_445_637 | 797744 | 798148 | + | HTH_AraC | HTH_AraC |
| CAZyme | B41_contig_445 | B41_contig_445_638 | 798209 | 799402 | - | GH97 |
| CAZyme | B41_contig_445 | B41_contig_445_639 | 799341 | 801341 | - | GH97 |
| pfam | B41_contig_445 | B41_contig_445_640 | 801509 | 802861 | - | OEP | OEP |
| pfam | B41_contig_445 | B41_contig_445_641 | 802876 | 803997 | - | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| TC | B41_contig_445 | B41_contig_445_642 | 804084 | 805352 | - | 3.A.1.122.12 |
| TC | B41_contig_445 | B41_contig_445_643 | 805377 | 806642 | - | 3.A.1.122.1 |
| TC | B41_contig_445 | B41_contig_445_644 | 806635 | 807318 | - | 3.A.1.122.2 |
Gene ID: B41_contig_445_631
Type: CAZyme
Location: 787580 - 789271 (-)
Type: CAZyme
Location: 787580 - 789271 (-)
Gene ID: B41_contig_445_632
Type: pfam
Location: 789330 - 790169 (-)
Type: pfam
Location: 789330 - 790169 (-)
Gene ID: B41_contig_445_633
Type: TC
Location: 790350 - 792554 (+)
Type: TC
Location: 790350 - 792554 (+)
Gene ID: B41_contig_445_634
Type: pfam
Location: 793020 - 795212 (+)
Type: pfam
Location: 793020 - 795212 (+)
Gene ID: B41_contig_445_635
Type: pfam
Location: 795310 - 796470 (+)
Type: pfam
Location: 795310 - 796470 (+)
Gene ID: B41_contig_445_636
Type: CAZyme
Location: 796486 - 797457 (-)
Type: CAZyme
Location: 796486 - 797457 (-)
Gene ID: B41_contig_445_637
Type: TF
Location: 797744 - 798148 (+)
Type: TF
Location: 797744 - 798148 (+)
Gene ID: B41_contig_445_638
Type: CAZyme
Location: 798209 - 799402 (-)
Type: CAZyme
Location: 798209 - 799402 (-)
Gene ID: B41_contig_445_639
Type: CAZyme
Location: 799341 - 801341 (-)
Type: CAZyme
Location: 799341 - 801341 (-)
Gene ID: B41_contig_445_640
Type: pfam
Location: 801509 - 802861 (-)
Type: pfam
Location: 801509 - 802861 (-)
Gene ID: B41_contig_445_641
Type: pfam
Location: 802876 - 803997 (-)
Type: pfam
Location: 802876 - 803997 (-)
Gene ID: B41_contig_445_642
Type: TC
Location: 804084 - 805352 (-)
Type: TC
Location: 804084 - 805352 (-)
Gene ID: B41_contig_445_643
Type: TC
Location: 805377 - 806642 (-)
Type: TC
Location: 805377 - 806642 (-)
Gene ID: B41_contig_445_644
Type: TC
Location: 806635 - 807318 (-)
Type: TC
Location: 806635 - 807318 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B41_contig_445_638 | vegetarian > omnivore | 1.04541 | 0.00560 |