Cluster: B41.bin_1_CGC32
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: B41.bin_1
- CGC Family ID: CGCFAM_02082
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B41_contig_445 | B41_contig_445_1074 | 1363944 | 1366265 | + | GH92 |
| CAZyme | B41_contig_445 | B41_contig_445_1075 | 1366280 | 1367932 | + | GH156 |
| CAZyme | B41_contig_445 | B41_contig_445_1076 | 1368344 | 1369813 | - | GH28 |
| CAZyme | B41_contig_445 | B41_contig_445_1077 | 1369864 | 1372746 | - | GH106 |
| CAZyme | B41_contig_445 | B41_contig_445_1078 | 1372763 | 1373515 | - | GH28 |
| CAZyme | B41_contig_445 | B41_contig_445_1079 | 1373573 | 1375054 | - | GH28 |
| pfam | B41_contig_445 | B41_contig_445_1080 | 1375217 | 1376644 | + | PD40 | PD40 |
| pfam | B41_contig_445 | B41_contig_445_1081 | 1376658 | 1378343 | + | DUF6057 |
| TC | B41_contig_445 | B41_contig_445_1082 | 1378415 | 1380256 | - | 8.A.46.1.6 |
| TC | B41_contig_445 | B41_contig_445_1083 | 1380270 | 1382561 | - | 1.B.14.6.1 |
| TC | B41_contig_445 | B41_contig_445_1084 | 1382580 | 1383428 | - | 1.B.14.6.1 |
Gene ID: B41_contig_445_1074
Type: CAZyme
Location: 1363944 - 1366265 (+)
Type: CAZyme
Location: 1363944 - 1366265 (+)
Gene ID: B41_contig_445_1075
Type: CAZyme
Location: 1366280 - 1367932 (+)
Type: CAZyme
Location: 1366280 - 1367932 (+)
Gene ID: B41_contig_445_1076
Type: CAZyme
Location: 1368344 - 1369813 (-)
Type: CAZyme
Location: 1368344 - 1369813 (-)
Gene ID: B41_contig_445_1077
Type: CAZyme
Location: 1369864 - 1372746 (-)
Type: CAZyme
Location: 1369864 - 1372746 (-)
Gene ID: B41_contig_445_1078
Type: CAZyme
Location: 1372763 - 1373515 (-)
Type: CAZyme
Location: 1372763 - 1373515 (-)
Gene ID: B41_contig_445_1079
Type: CAZyme
Location: 1373573 - 1375054 (-)
Type: CAZyme
Location: 1373573 - 1375054 (-)
Gene ID: B41_contig_445_1080
Type: pfam
Location: 1375217 - 1376644 (+)
Type: pfam
Location: 1375217 - 1376644 (+)
Gene ID: B41_contig_445_1081
Type: pfam
Location: 1376658 - 1378343 (+)
Type: pfam
Location: 1376658 - 1378343 (+)
Gene ID: B41_contig_445_1082
Type: TC
Location: 1378415 - 1380256 (-)
Type: TC
Location: 1378415 - 1380256 (-)
Gene ID: B41_contig_445_1083
Type: TC
Location: 1380270 - 1382561 (-)
Type: TC
Location: 1380270 - 1382561 (-)
Gene ID: B41_contig_445_1084
Type: TC
Location: 1382580 - 1383428 (-)
Type: TC
Location: 1382580 - 1383428 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B41_contig_445_1077 | vegetarian > omnivore | 1.23986 | 0.00560 |
| B41_contig_445_1078 | vegetarian > omnivore | 1.44811 | 0.00560 |
| B41_contig_445_1079 | vegetarian > omnivore | 1.29759 | 0.00560 |
| B41_contig_445_1080 | vegetarian > omnivore | 1.42047 | 0.00560 |
| B41_contig_445_1081 | vegetarian > omnivore | 1.47825 | 0.00560 |
| B41_contig_445_1082 | vegetarian > omnivore | 1.01405 | 0.00560 |
| B41_contig_445_1083 | vegetarian > omnivore | 1.19822 | 0.00560 |
| B41_contig_445_1084 | vegetarian > omnivore | 1.27738 | 0.00560 |