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Genome Details

Selected Rep_genome_ID: AG278_bin.42
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Agathobacter
→
Species
Agathobacter sp900549895
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG278_bin.42 2,502,675 97.83% 0.64% NA Africa H3AfricaPhase2
DM192_maxbin.010_sub 2,598,597 96.38% 0.93% NA Africa H3AfricaPhase2
HRGMv2_2329 2,490,673 96.94% 0.644% Ethiopia Africa HRGM
MGYG000004414 2,422,277 95.49% 0.72% Israel Asia UHGG
Rep_2168 2,183,280 92.2876% 1.28824% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
AG278_bin.42_CGC1 CGCFAM_00021 Yes 3 1
AG278_bin.42_CGC34 CGCFAM_00208 Yes 8 3
AG278_bin.42_CGC9 CGCFAM_00224 Yes 13 6
AG278_bin.42_CGC26 CGCFAM_00270 Yes 13 1
AG278_bin.42_CGC14 CGCFAM_00335 Yes 8 2
AG278_bin.42_CGC10 CGCFAM_00380 Yes 4 2
AG278_bin.42_CGC22 CGCFAM_00411 Yes 5 1
AG278_bin.42_CGC8 CGCFAM_00457 Yes 4 2
AG278_bin.42_CGC27 CGCFAM_00500 Yes 6 1
AG278_bin.42_CGC31 CGCFAM_00951 Yes 6 2
AG278_bin.42_CGC7 CGCFAM_01550 Yes 9 4
AG278_bin.42_CGC16 CGCFAM_01621 Yes 3 2
AG278_bin.42_CGC13 CGCFAM_01634 Yes 16 1
AG278_bin.42_CGC32 CGCFAM_04368 Yes 4 1
AG278_bin.42_CGC12 CGCFAM_04659 Yes 5 1
AG278_bin.42_CGC15 CGCFAM_04660 Yes 3 1
AG278_bin.42_CGC25 CGCFAM_04661 Yes 6 1
AG278_bin.42_CGC3 CGCFAM_04662 Yes 3 1
AG278_bin.42_CGC19 CGCFAM_06986 Yes 12 6
AG278_bin.42_CGC11 CGCFAM_07085 Yes 5 1
AG278_bin.42_CGC2 CGCFAM_07086 Yes 7 2
AG278_bin.42_CGC21 CGCFAM_07087 Yes 11 2
AG278_bin.42_CGC23 CGCFAM_07088 Yes 3 1
AG278_bin.42_CGC35 CGCFAM_07089 Yes 6 1
AG278_bin.42_CGC4 CGCFAM_07090 Yes 5 2
Top CAZyme Families