Cluster: AG278_bin.42_CGC14
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: AG278_bin.42
- CGC Family ID: CGCFAM_00335
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_295213 | k141_295213_39 | 43128 | 45131 | - | GH42 |
| TF | k141_295213 | k141_295213_40 | 45406 | 46470 | + | LacI |
| pfam | k141_295213 | k141_295213_41 | 47238 | 48533 | + | SBP_bac_8 |
| TC | k141_295213 | k141_295213_42 | 48662 | 50083 | + | 3.A.1.1.27 |
| TC | k141_295213 | k141_295213_43 | 50083 | 50928 | + | 3.A.1.1.27 |
| NULL(UNKNOWN) | k141_295213 | k141_295213_44 | 50961 | 52811 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_295213 | k141_295213_45 | 52784 | 53002 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_295213 | k141_295213_46 | 53059 | 54174 | + | GH53 |
Gene ID: k141_295213_39
Type: CAZyme
Location: 43128 - 45131 (-)
Type: CAZyme
Location: 43128 - 45131 (-)
Gene ID: k141_295213_40
Type: TF
Location: 45406 - 46470 (+)
Type: TF
Location: 45406 - 46470 (+)
Gene ID: k141_295213_41
Type: pfam
Location: 47238 - 48533 (+)
Type: pfam
Location: 47238 - 48533 (+)
Gene ID: k141_295213_42
Type: TC
Location: 48662 - 50083 (+)
Type: TC
Location: 48662 - 50083 (+)
Gene ID: k141_295213_43
Type: TC
Location: 50083 - 50928 (+)
Type: TC
Location: 50083 - 50928 (+)
Gene ID: k141_295213_44
Type:
Location: 50961 - 52811 (+)
Type:
Location: 50961 - 52811 (+)
Gene ID: k141_295213_45
Type:
Location: 52784 - 53002 (+)
Type:
Location: 52784 - 53002 (+)
Gene ID: k141_295213_46
Type: CAZyme
Location: 53059 - 54174 (+)
Type: CAZyme
Location: 53059 - 54174 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp900549895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_295213_42 | vegetarian > omnivore | 2.04172 | 0.00900 |
| k141_295213_42 | vegetarian > vegan | 2.16522 | 0.00364 |
| k141_295213_44 | vegetarian > vegan | 1.34744 | 0.00364 |
| k141_295213_45 | vegetarian > omnivore | 1.58961 | 0.00565 |
| k141_295213_45 | vegetarian > vegan | 1.49368 | 0.00364 |
| k141_295213_46 | vegetarian > omnivore | 1.18859 | 0.00900 |
| k141_295213_46 | vegetarian > vegan | 1.05264 | 0.00364 |