Cluster: AG278_bin.42_CGC9
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: AG278_bin.42
- CGC Family ID: CGCFAM_00224
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_177262 | k141_177262_1 | 2 | 727 | - | 3.A.1.1.29 |
| TF | k141_177262 | k141_177262_2 | 875 | 2464 | - | HTH_AraC | HTH_AraC |
| TC | k141_177262 | k141_177262_3 | 2499 | 4265 | - | 8.A.59.2.1 |
| CAZyme | k141_177262 | k141_177262_4 | 4405 | 6549 | - | GH3 |
| CAZyme | k141_177262 | k141_177262_5 | 6581 | 8140 | - | CBM91 | GH43_12 |
| CAZyme | k141_177262 | k141_177262_6 | 8151 | 9893 | - | CE17 |
| STP | k141_177262 | k141_177262_7 | 9893 | 11779 | - | GGDEF | Peripla_BP_3 |
| CAZyme | k141_177262 | k141_177262_8 | 11931 | 16028 | - | CBM22 | CBM86 | CBM9 | GH10 |
| pfam | k141_177262 | k141_177262_9 | 16847 | 18304 | - | FGGY_N | FGGY_C |
| pfam | k141_177262 | k141_177262_10 | 18314 | 19804 | - | Fucose_iso_C |
| TC | k141_177262 | k141_177262_11 | 19914 | 21959 | - | 1.B.52.2.2 |
| CAZyme | k141_177262 | k141_177262_12 | 21973 | 22854 | - | CE1 |
| CAZyme | k141_177262 | k141_177262_13 | 22897 | 24039 | - | GH8 |
Gene ID: k141_177262_1
Type: TC
Location: 2 - 727 (-)
Type: TC
Location: 2 - 727 (-)
Gene ID: k141_177262_2
Type: TF
Location: 875 - 2464 (-)
Type: TF
Location: 875 - 2464 (-)
Gene ID: k141_177262_3
Type: TC
Location: 2499 - 4265 (-)
Type: TC
Location: 2499 - 4265 (-)
Gene ID: k141_177262_4
Type: CAZyme
Location: 4405 - 6549 (-)
Type: CAZyme
Location: 4405 - 6549 (-)
Gene ID: k141_177262_5
Type: CAZyme
Location: 6581 - 8140 (-)
Type: CAZyme
Location: 6581 - 8140 (-)
Gene ID: k141_177262_6
Type: CAZyme
Location: 8151 - 9893 (-)
Type: CAZyme
Location: 8151 - 9893 (-)
Gene ID: k141_177262_7
Type: STP
Location: 9893 - 11779 (-)
Type: STP
Location: 9893 - 11779 (-)
Gene ID: k141_177262_8
Type: CAZyme
Location: 11931 - 16028 (-)
Type: CAZyme
Location: 11931 - 16028 (-)
Gene ID: k141_177262_9
Type: pfam
Location: 16847 - 18304 (-)
Type: pfam
Location: 16847 - 18304 (-)
Gene ID: k141_177262_10
Type: pfam
Location: 18314 - 19804 (-)
Type: pfam
Location: 18314 - 19804 (-)
Gene ID: k141_177262_11
Type: TC
Location: 19914 - 21959 (-)
Type: TC
Location: 19914 - 21959 (-)
Gene ID: k141_177262_12
Type: CAZyme
Location: 21973 - 22854 (-)
Type: CAZyme
Location: 21973 - 22854 (-)
Gene ID: k141_177262_13
Type: CAZyme
Location: 22897 - 24039 (-)
Type: CAZyme
Location: 22897 - 24039 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp900549895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.