Cluster: AG278_bin.42_CGC21
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: AG278_bin.42
- CGC Family ID: CGCFAM_07087
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_48626 | k141_48626_3 | 2191 | 4383 | - | GH36 |
| NULL(UNKNOWN) | k141_48626 | k141_48626_4 | 4388 | 5119 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_48626 | k141_48626_5 | 5159 | 6886 | - | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| TC | k141_48626 | k141_48626_6 | 6989 | 8788 | - | 3.A.1.106.2 |
| CAZyme | k141_48626 | k141_48626_7 | 8794 | 9738 | - | GH113 |
| TF | k141_48626 | k141_48626_8 | 9849 | 10718 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | k141_48626 | k141_48626_9 | 10880 | 11395 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_48626 | k141_48626_10 | 11503 | 12165 | - | 3.A.1.149.1 |
| TF | k141_48626 | k141_48626_11 | 12167 | 12532 | - | GntR |
| NULL(UNKNOWN) | k141_48626 | k141_48626_12 | 12526 | 13227 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_48626 | k141_48626_13 | 13205 | 14074 | - | 3.A.1.149.1 |
Gene ID: k141_48626_3
Type: CAZyme
Location: 2191 - 4383 (-)
Type: CAZyme
Location: 2191 - 4383 (-)
Gene ID: k141_48626_4
Type:
Location: 4388 - 5119 (-)
Type:
Location: 4388 - 5119 (-)
Gene ID: k141_48626_5
Type: pfam
Location: 5159 - 6886 (-)
Type: pfam
Location: 5159 - 6886 (-)
Gene ID: k141_48626_6
Type: TC
Location: 6989 - 8788 (-)
Type: TC
Location: 6989 - 8788 (-)
Gene ID: k141_48626_7
Type: CAZyme
Location: 8794 - 9738 (-)
Type: CAZyme
Location: 8794 - 9738 (-)
Gene ID: k141_48626_8
Type: TF
Location: 9849 - 10718 (+)
Type: TF
Location: 9849 - 10718 (+)
Gene ID: k141_48626_9
Type:
Location: 10880 - 11395 (-)
Type:
Location: 10880 - 11395 (-)
Gene ID: k141_48626_10
Type: TC
Location: 11503 - 12165 (-)
Type: TC
Location: 11503 - 12165 (-)
Gene ID: k141_48626_11
Type: TF
Location: 12167 - 12532 (-)
Type: TF
Location: 12167 - 12532 (-)
Gene ID: k141_48626_12
Type:
Location: 12526 - 13227 (-)
Type:
Location: 12526 - 13227 (-)
Gene ID: k141_48626_13
Type: TC
Location: 13205 - 14074 (-)
Type: TC
Location: 13205 - 14074 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp900549895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.