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Cluster: AG278_bin.42_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_185479 k141_185479_6 5309 9499 - CBM23 | GH26
STP k141_185479 k141_185479_7 9787 12078 - GGDEF | Peripla_BP_3
STP k141_185479 k141_185479_8 12094 12705 - NUDIX
CAZyme k141_185479 k141_185479_9 12809 15121 - GH1
CAZyme k141_185479 k141_185479_10 15132 16238 - CBM35inCE17 | CE17
CAZyme k141_185479 k141_185479_11 16294 17340 - CE2
CAZyme k141_185479 k141_185479_12 17342 18367 - GH130_2
CAZyme k141_185479 k141_185479_13 18480 19658 - GH130_1
pfam k141_185479 k141_185479_14 19658 20827 - GlcNAc_2-epim
TC k141_185479 k141_185479_15 20853 21728 - 3.A.1.1.47
TC k141_185479 k141_185479_16 21728 22756 - 3.A.1.1.23
TC k141_185479 k141_185479_17 22856 24268 - 3.A.1.1.21
Gene ID: k141_185479_6
Type: CAZyme
Location: 5309 - 9499 (-)
Gene ID: k141_185479_7
Type: STP
Location: 9787 - 12078 (-)
Gene ID: k141_185479_8
Type: STP
Location: 12094 - 12705 (-)
Gene ID: k141_185479_9
Type: CAZyme
Location: 12809 - 15121 (-)
Gene ID: k141_185479_10
Type: CAZyme
Location: 15132 - 16238 (-)
Gene ID: k141_185479_11
Type: CAZyme
Location: 16294 - 17340 (-)
Gene ID: k141_185479_12
Type: CAZyme
Location: 17342 - 18367 (-)
Gene ID: k141_185479_13
Type: CAZyme
Location: 18480 - 19658 (-)
Gene ID: k141_185479_14
Type: pfam
Location: 19658 - 20827 (-)
Gene ID: k141_185479_15
Type: TC
Location: 20853 - 21728 (-)
Gene ID: k141_185479_16
Type: TC
Location: 21728 - 22756 (-)
Gene ID: k141_185479_17
Type: TC
Location: 22856 - 24268 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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