Cluster: AG278_bin.42_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: AG278_bin.42
- CGC Family ID: CGCFAM_07090
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_33298 | k141_33298_39 | 35944 | 37335 | + | 2.A.22.5.3 |
| TF | k141_33298 | k141_33298_40 | 37400 | 38179 | - | MerR |
| NULL(UNKNOWN) | k141_33298 | k141_33298_41 | 38315 | 40225 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_33298 | k141_33298_42 | 40349 | 42016 | - | GH13_31 |
| CAZyme | k141_33298 | k141_33298_43 | 42148 | 43821 | - | GH13_31 |
Gene ID: k141_33298_39
Type: TC
Location: 35944 - 37335 (+)
Type: TC
Location: 35944 - 37335 (+)
Gene ID: k141_33298_40
Type: TF
Location: 37400 - 38179 (-)
Type: TF
Location: 37400 - 38179 (-)
Gene ID: k141_33298_41
Type:
Location: 38315 - 40225 (+)
Type:
Location: 38315 - 40225 (+)
Gene ID: k141_33298_42
Type: CAZyme
Location: 40349 - 42016 (-)
Type: CAZyme
Location: 40349 - 42016 (-)
Gene ID: k141_33298_43
Type: CAZyme
Location: 42148 - 43821 (-)
Type: CAZyme
Location: 42148 - 43821 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp900549895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_33298_43 | vegan > omnivore | 1.59008 | 0.00141 |