Cluster: AG278_bin.42_CGC26
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: AG278_bin.42
- CGC Family ID: CGCFAM_00270
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_311066 | k141_311066_46 | 47782 | 49179 | + | 2.A.40.2.1 |
| TC | k141_311066 | k141_311066_47 | 49331 | 50869 | + | 3.A.1.3.20 |
| TC | k141_311066 | k141_311066_48 | 50859 | 51599 | + | 3.A.1.3.25 |
| TF | k141_311066 | k141_311066_49 | 51740 | 52216 | + | MarR |
| TC | k141_311066 | k141_311066_50 | 52200 | 54521 | + | 3.A.1.135.6 |
| TC | k141_311066 | k141_311066_51 | 54514 | 56361 | + | 3.A.1.135.6 |
| STP | k141_311066 | k141_311066_52 | 56548 | 57339 | + | Response_reg | Spo0A_C |
| CAZyme | k141_311066 | k141_311066_53 | 57378 | 58829 | + | GT5 |
| pfam | k141_311066 | k141_311066_54 | 58864 | 59754 | - | DUF5688 |
| TC | k141_311066 | k141_311066_55 | 59894 | 60967 | - | 3.A.1.11.7 |
| TC | k141_311066 | k141_311066_56 | 60987 | 61769 | - | 3.A.1.11.7 |
| TC | k141_311066 | k141_311066_57 | 61763 | 62587 | - | 3.A.1.11.1 |
| TC | k141_311066 | k141_311066_58 | 62580 | 63653 | - | 3.A.1.11.8 |
Gene ID: k141_311066_46
Type: TC
Location: 47782 - 49179 (+)
Type: TC
Location: 47782 - 49179 (+)
Gene ID: k141_311066_47
Type: TC
Location: 49331 - 50869 (+)
Type: TC
Location: 49331 - 50869 (+)
Gene ID: k141_311066_48
Type: TC
Location: 50859 - 51599 (+)
Type: TC
Location: 50859 - 51599 (+)
Gene ID: k141_311066_49
Type: TF
Location: 51740 - 52216 (+)
Type: TF
Location: 51740 - 52216 (+)
Gene ID: k141_311066_50
Type: TC
Location: 52200 - 54521 (+)
Type: TC
Location: 52200 - 54521 (+)
Gene ID: k141_311066_51
Type: TC
Location: 54514 - 56361 (+)
Type: TC
Location: 54514 - 56361 (+)
Gene ID: k141_311066_52
Type: STP
Location: 56548 - 57339 (+)
Type: STP
Location: 56548 - 57339 (+)
Gene ID: k141_311066_53
Type: CAZyme
Location: 57378 - 58829 (+)
Type: CAZyme
Location: 57378 - 58829 (+)
Gene ID: k141_311066_54
Type: pfam
Location: 58864 - 59754 (-)
Type: pfam
Location: 58864 - 59754 (-)
Gene ID: k141_311066_55
Type: TC
Location: 59894 - 60967 (-)
Type: TC
Location: 59894 - 60967 (-)
Gene ID: k141_311066_56
Type: TC
Location: 60987 - 61769 (-)
Type: TC
Location: 60987 - 61769 (-)
Gene ID: k141_311066_57
Type: TC
Location: 61763 - 62587 (-)
Type: TC
Location: 61763 - 62587 (-)
Gene ID: k141_311066_58
Type: TC
Location: 62580 - 63653 (-)
Type: TC
Location: 62580 - 63653 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp900549895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_311066_51 | vegetarian > omnivore | 1.26060 | 0.00900 |