Genome Details
Selected Rep_genome_ID: A49.bin_13
Total Genomes Found: 35
Total Genomes Found: 35
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A49.bin_13 | 3,252,510 | 97.96% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR090359 | 2,468,957 | 97.28% | 0.02% | China | Asia | CGMR |
| HRGMv2_2724 | 3,532,120 | 97.27% | 0% | South Korea | Asia | HRGM |
| Rep_3056 | 3,568,790 | 97.2789% | 0.680272% | NA | NA | WIS |
| SPMP06_bin.100 | 3,097,127 | 95.92% | 0% | Singapore | Asia | SPMP |
| SPMP101_bin.25 | 3,001,325 | 91.19% | 0.68% | Singapore | Asia | SPMP |
| SPMP102_bin.91 | 2,544,947 | 91.33% | 1.36% | Singapore | Asia | SPMP |
| SPMP105_bin.60 | 2,619,691 | 93.37% | 0.68% | Singapore | Asia | SPMP |
| SPMP106_bin.7 | 2,293,081 | 97.28% | 0% | Singapore | Asia | SPMP |
| SPMP107_bin.12 | 2,658,005 | 91.38% | 4.9% | Singapore | Asia | SPMP |
| SPMP12_bin.2 | 2,651,127 | 94.56% | 0% | Singapore | Asia | SPMP |
| SPMP16_bin.21 | 2,651,157 | 94.9% | 0% | Singapore | Asia | SPMP |
| SPMP18_bin.26 | 2,834,877 | 95.92% | 0% | Singapore | Asia | SPMP |
| SPMP19_bin.51 | 2,273,307 | 93.2% | 0% | Singapore | Asia | SPMP |
| SPMP20_bin.85 | 2,392,966 | 94.05% | 1.13% | Singapore | Asia | SPMP |
| SPMP22_bin.23 | 2,748,346 | 95.75% | 0% | Singapore | Asia | SPMP |
| SPMP23_bin.71 | 2,426,182 | 92.86% | 0.68% | Singapore | Asia | SPMP |
| SPMP24_bin.52 | 2,865,621 | 96.23% | 0.68% | Singapore | Asia | SPMP |
| SPMP25_bin.72 | 2,446,103 | 95.58% | 2.72% | Singapore | Asia | SPMP |
| SPMP32_bin.14 | 2,801,291 | 93.63% | 0.23% | Singapore | Asia | SPMP |
| SPMP36_bin.60 | 2,791,759 | 93.54% | 0.68% | Singapore | Asia | SPMP |
| SPMP38_bin.86 | 2,818,977 | 94.9% | 0% | Singapore | Asia | SPMP |
| SPMP41_bin.95 | 2,236,072 | 91.91% | 0% | Singapore | Asia | SPMP |
| SPMP43_bin.70 | 2,743,144 | 95.01% | 1.13% | Singapore | Asia | SPMP |
| SPMP44_bin.140 | 2,993,982 | 97.03% | 1.36% | Singapore | Asia | SPMP |
| SPMP49_bin.11 | 2,934,526 | 91.07% | 0.85% | Singapore | Asia | SPMP |
| SPMP57_bin.10 | 2,532,719 | 92.86% | 1.36% | Singapore | Asia | SPMP |
| SPMP70_bin.40 | 2,861,385 | 92.84% | 0.68% | Singapore | Asia | SPMP |
| SPMP71_bin.98 | 2,497,362 | 94.45% | 0.02% | Singapore | Asia | SPMP |
| SPMP80_bin.74 | 2,664,015 | 95.75% | 0% | Singapore | Asia | SPMP |
| SPMP81_bin.80 | 2,738,871 | 92.86% | 2.04% | Singapore | Asia | SPMP |
| SPMP82_bin.4 | 2,700,049 | 93.2% | 1.36% | Singapore | Asia | SPMP |
| SPMP83_bin.103 | 2,787,917 | 95.39% | 0% | Singapore | Asia | SPMP |
| SPMP98_bin.64 | 2,429,472 | 94.52% | 0% | Singapore | Asia | SPMP |
| SW130_14_sub | 3,109,644 | 97.28% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| A49.bin_13_CGC16 | CGCFAM_01317 | Yes | 8 | 2 | |
| A49.bin_13_CGC9 | CGCFAM_01318 | Yes | 8 | 1 | |
| A49.bin_13_CGC34 | CGCFAM_01928 | Yes | 10 | 2 | |
| A49.bin_13_CGC21 | CGCFAM_03120 | Yes | 4 | 1 | |
| A49.bin_13_CGC6 | CGCFAM_03125 | Yes | 14 | 2 | |
| A49.bin_13_CGC7 | CGCFAM_03126 | Yes | 7 | 2 | |
| A49.bin_13_CGC12 | CGCFAM_04431 | Yes | 7 | 3 | |
| A49.bin_13_CGC28 | CGCFAM_04432 | Yes | 5 | 2 | |
| A49.bin_13_CGC19 | CGCFAM_06770 | Yes | 5 | 1 | |
| A49.bin_13_CGC27 | CGCFAM_06771 | Yes | 11 | 4 | |
| A49.bin_13_CGC30 | CGCFAM_06772 | Yes | 3 | 1 |
Top CAZyme Families