Cluster: A49.bin_13_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.bin_13
- CGC Family ID: CGCFAM_03120
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A49_contig_140 | A49_contig_140_1358 | 1547003 | 1548055 | + | 9.A.23.1.1 |
| NULL(UNKNOWN) | A49_contig_140 | A49_contig_140_1359 | 1548451 | 1548882 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | A49_contig_140 | A49_contig_140_1360 | 1548953 | 1549744 | - | GGDEF |
| CAZyme | A49_contig_140 | A49_contig_140_1361 | 1549897 | 1551414 | - | GH77 |
Gene ID: A49_contig_140_1358
Type: TC
Location: 1547003 - 1548055 (+)
Type: TC
Location: 1547003 - 1548055 (+)
Gene ID: A49_contig_140_1359
Type:
Location: 1548451 - 1548882 (-)
Type:
Location: 1548451 - 1548882 (-)
Gene ID: A49_contig_140_1360
Type: STP
Location: 1548953 - 1549744 (-)
Type: STP
Location: 1548953 - 1549744 (-)
Gene ID: A49_contig_140_1361
Type: CAZyme
Location: 1549897 - 1551414 (-)
Type: CAZyme
Location: 1549897 - 1551414 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.