Cluster: A49.bin_13_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.bin_13
- CGC Family ID: CGCFAM_06770
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A49_contig_140 | A49_contig_140_1296 | 1477590 | 1479158 | - | GH13_44 |
| TC | A49_contig_140 | A49_contig_140_1297 | 1479540 | 1481270 | + | 2.A.114.1.3 |
| TC | A49_contig_140 | A49_contig_140_1298 | 1481449 | 1482372 | + | 3.A.1.3.20 |
| TC | A49_contig_140 | A49_contig_140_1299 | 1482453 | 1483277 | + | 3.A.1.3.20 |
| TC | A49_contig_140 | A49_contig_140_1300 | 1483270 | 1484010 | + | 3.A.1.3.20 |
Gene ID: A49_contig_140_1296
Type: CAZyme
Location: 1477590 - 1479158 (-)
Type: CAZyme
Location: 1477590 - 1479158 (-)
Gene ID: A49_contig_140_1297
Type: TC
Location: 1479540 - 1481270 (+)
Type: TC
Location: 1479540 - 1481270 (+)
Gene ID: A49_contig_140_1298
Type: TC
Location: 1481449 - 1482372 (+)
Type: TC
Location: 1481449 - 1482372 (+)
Gene ID: A49_contig_140_1299
Type: TC
Location: 1482453 - 1483277 (+)
Type: TC
Location: 1482453 - 1483277 (+)
Gene ID: A49_contig_140_1300
Type: TC
Location: 1483270 - 1484010 (+)
Type: TC
Location: 1483270 - 1484010 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.