Cluster: A49.bin_13_CGC30
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.bin_13
- CGC Family ID: CGCFAM_06772
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A49_contig_140 | A49_contig_140_1890 | 2225687 | 2228074 | + | GH2 |
| NULL(UNKNOWN) | A49_contig_140 | A49_contig_140_1891 | 2228091 | 2228234 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A49_contig_140 | A49_contig_140_1892 | 2228579 | 2233018 | + | 2.A.6.3.6 |
Gene ID: A49_contig_140_1890
Type: CAZyme
Location: 2225687 - 2228074 (+)
Type: CAZyme
Location: 2225687 - 2228074 (+)
Gene ID: A49_contig_140_1891
Type:
Location: 2228091 - 2228234 (+)
Type:
Location: 2228091 - 2228234 (+)
Gene ID: A49_contig_140_1892
Type: TC
Location: 2228579 - 2233018 (+)
Type: TC
Location: 2228579 - 2233018 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.