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Cluster: A49.bin_13_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A49_contig_140 A49_contig_140_1092 1236248 1237300 - GT4
CAZyme A49_contig_140 A49_contig_140_1093 1237353 1238528 - GH3
pfam A49_contig_140 A49_contig_140_1094 1238835 1239845 - DUF4340 | DUF4340
pfam A49_contig_140 A49_contig_140_1095 1239855 1241279 - ABC_transp_aux
TC A49_contig_140 A49_contig_140_1096 1241293 1242156 - 3.A.1.132.1
TC A49_contig_140 A49_contig_140_1097 1242140 1243183 - 3.A.1.132.4
pfam A49_contig_140 A49_contig_140_1098 1243356 1244135 - DUF975
TC A49_contig_140 A49_contig_140_1099 1244829 1246337 - 2.A.23.4.1
Gene ID: A49_contig_140_1092
Type: CAZyme
Location: 1236248 - 1237300 (-)
Gene ID: A49_contig_140_1093
Type: CAZyme
Location: 1237353 - 1238528 (-)
Gene ID: A49_contig_140_1094
Type: pfam
Location: 1238835 - 1239845 (-)
Gene ID: A49_contig_140_1095
Type: pfam
Location: 1239855 - 1241279 (-)
Gene ID: A49_contig_140_1096
Type: TC
Location: 1241293 - 1242156 (-)
Gene ID: A49_contig_140_1097
Type: TC
Location: 1242140 - 1243183 (-)
Gene ID: A49_contig_140_1098
Type: pfam
Location: 1243356 - 1244135 (-)
Gene ID: A49_contig_140_1099
Type: TC
Location: 1244829 - 1246337 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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