Genome Details
Selected Rep_genome_ID: A112.bin_6
Total Genomes Found: 7
Total Genomes Found: 7
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900753715
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A112.bin_6 | 3,403,463 | 98.97% | 0.16% | China(Inner Mongolia) | Asia | IMGG |
| AG452_bin.92_sub | 2,982,846 | 93.62% | 0.42% | NA | Africa | H3AfricaPhase2 |
| CGMR039801 | 2,845,809 | 96.48% | 1.84% | China | Asia | CGMR |
| HRGMv2_2223 | 2,952,353 | 98.81% | 0.322% | United Kingdom | Europe | HRGM |
| MGYG000003892 | 2,971,162 | 97.07% | 0.32% | United States | North America | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-I-L_O_22_2670.23 | 3,030,405 | 97.52% | 0.16% | NA | Africa | Hadza |
| Rep_2175 | 3,059,468 | 98.4903% | 1.12721% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| A112.bin_6_CGC36 | CGCFAM_00951 | Yes | 6 | 2 | |
| A112.bin_6_CGC46 | CGCFAM_01096 | Yes | 3 | 1 | |
| A112.bin_6_CGC21 | CGCFAM_01258 | Yes | 7 | 3 | |
| A112.bin_6_CGC39 | CGCFAM_01524 | Yes | 6 | 1 | |
| A112.bin_6_CGC4 | CGCFAM_01851 | Yes | 3 | 1 | |
| A112.bin_6_CGC23 | CGCFAM_02329 | Yes | 8 | 2 | |
| A112.bin_6_CGC42 | CGCFAM_03002 | Yes | 7 | 2 | |
| A112.bin_6_CGC9 | CGCFAM_03005 | Yes | 6 | 1 | |
| A112.bin_6_CGC27 | CGCFAM_04259 | Yes | 3 | 1 | |
| A112.bin_6_CGC33 | CGCFAM_04260 | Yes | 5 | 1 | |
| A112.bin_6_CGC48 | CGCFAM_06568 | Yes | 5 | 2 | |
| A112.bin_6_CGC5 | CGCFAM_06569 | Yes | 10 | 1 |
Top CAZyme Families