Cluster: A112.bin_6_CGC46
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A112.bin_6
- CGC Family ID: CGCFAM_01096
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A112_contig_327 | A112_contig_327_89 | 80559 | 82355 | + | GH146 |
| TF | A112_contig_327 | A112_contig_327_90 | 82348 | 83196 | - | HTH_AraC | HTH_AraC |
| TC | A112_contig_327 | A112_contig_327_91 | 83219 | 86563 | - | 3.A.17.1.1 |
Gene ID: A112_contig_327_89
Type: CAZyme
Location: 80559 - 82355 (+)
Type: CAZyme
Location: 80559 - 82355 (+)
Gene ID: A112_contig_327_90
Type: TF
Location: 82348 - 83196 (-)
Type: TF
Location: 82348 - 83196 (-)
Gene ID: A112_contig_327_91
Type: TC
Location: 83219 - 86563 (-)
Type: TC
Location: 83219 - 86563 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900753715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A112_contig_327_91 | vegetarian > omnivore | 1.54253 | 0.00454 |