Cluster: A112.bin_6_CGC23
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: A112.bin_6
- CGC Family ID: CGCFAM_02329
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A112_contig_1248 | A112_contig_1248_210 | 239678 | 240619 | - | GT2 |
| pfam | A112_contig_1248 | A112_contig_1248_211 | 240763 | 241908 | - | Acyl_transf_3 |
| CAZyme | A112_contig_1248 | A112_contig_1248_212 | 241911 | 243389 | - | GT105 |
| TC | A112_contig_1248 | A112_contig_1248_213 | 243403 | 244815 | - | 2.A.50.2.1 |
| NULL(UNKNOWN) | A112_contig_1248 | A112_contig_1248_214 | 244843 | 246450 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A112_contig_1248 | A112_contig_1248_215 | 246658 | 247986 | - | LicD |
| TC | A112_contig_1248 | A112_contig_1248_216 | 248017 | 248745 | - | 3.A.1.103.4 |
| TC | A112_contig_1248 | A112_contig_1248_217 | 248761 | 250095 | - | 3.A.1.103.2 |
Gene ID: A112_contig_1248_210
Type: CAZyme
Location: 239678 - 240619 (-)
Type: CAZyme
Location: 239678 - 240619 (-)
Gene ID: A112_contig_1248_211
Type: pfam
Location: 240763 - 241908 (-)
Type: pfam
Location: 240763 - 241908 (-)
Gene ID: A112_contig_1248_212
Type: CAZyme
Location: 241911 - 243389 (-)
Type: CAZyme
Location: 241911 - 243389 (-)
Gene ID: A112_contig_1248_213
Type: TC
Location: 243403 - 244815 (-)
Type: TC
Location: 243403 - 244815 (-)
Gene ID: A112_contig_1248_214
Type:
Location: 244843 - 246450 (-)
Type:
Location: 244843 - 246450 (-)
Gene ID: A112_contig_1248_215
Type: pfam
Location: 246658 - 247986 (-)
Type: pfam
Location: 246658 - 247986 (-)
Gene ID: A112_contig_1248_216
Type: TC
Location: 248017 - 248745 (-)
Type: TC
Location: 248017 - 248745 (-)
Gene ID: A112_contig_1248_217
Type: TC
Location: 248761 - 250095 (-)
Type: TC
Location: 248761 - 250095 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900753715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.