Cluster: A112.bin_6_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A112.bin_6
- CGC Family ID: CGCFAM_03005
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A112_contig_1332 | A112_contig_1332_558 | 609156 | 610139 | - | CE4 |
| NULL(UNKNOWN) | A112_contig_1332 | A112_contig_1332_559 | 610274 | 610819 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | A112_contig_1332 | A112_contig_1332_560 | 610809 | 611879 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A112_contig_1332 | A112_contig_1332_561 | 611895 | 613487 | - | 2.A.50.2.1 |
| pfam | A112_contig_1332 | A112_contig_1332_562 | 613491 | 613733 | - | PP-binding |
| TC | A112_contig_1332 | A112_contig_1332_563 | 613748 | 615262 | - | 4.C.1.1.7 |
Gene ID: A112_contig_1332_558
Type: CAZyme
Location: 609156 - 610139 (-)
Type: CAZyme
Location: 609156 - 610139 (-)
Gene ID: A112_contig_1332_559
Type:
Location: 610274 - 610819 (-)
Type:
Location: 610274 - 610819 (-)
Gene ID: A112_contig_1332_560
Type:
Location: 610809 - 611879 (-)
Type:
Location: 610809 - 611879 (-)
Gene ID: A112_contig_1332_561
Type: TC
Location: 611895 - 613487 (-)
Type: TC
Location: 611895 - 613487 (-)
Gene ID: A112_contig_1332_562
Type: pfam
Location: 613491 - 613733 (-)
Type: pfam
Location: 613491 - 613733 (-)
Gene ID: A112_contig_1332_563
Type: TC
Location: 613748 - 615262 (-)
Type: TC
Location: 613748 - 615262 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900753715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.