Cluster: A112.bin_6_CGC39
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A112.bin_6
- CGC Family ID: CGCFAM_01524
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A112_contig_2717 | A112_contig_2717_105 | 111563 | 112276 | - | GT2 |
| TC | A112_contig_2717 | A112_contig_2717_106 | 112357 | 114408 | - | 3.A.1.134.4 |
| TC | A112_contig_2717 | A112_contig_2717_107 | 114401 | 115168 | - | 3.A.1.134.4 |
| STP | A112_contig_2717 | A112_contig_2717_108 | 115282 | 116274 | - | HATPase_c |
| TF | A112_contig_2717 | A112_contig_2717_109 | 116271 | 116942 | - | Trans_reg_C |
| TC | A112_contig_2717 | A112_contig_2717_110 | 116935 | 118032 | - | 9.B.34.1.3 |
Gene ID: A112_contig_2717_105
Type: CAZyme
Location: 111563 - 112276 (-)
Type: CAZyme
Location: 111563 - 112276 (-)
Gene ID: A112_contig_2717_106
Type: TC
Location: 112357 - 114408 (-)
Type: TC
Location: 112357 - 114408 (-)
Gene ID: A112_contig_2717_107
Type: TC
Location: 114401 - 115168 (-)
Type: TC
Location: 114401 - 115168 (-)
Gene ID: A112_contig_2717_108
Type: STP
Location: 115282 - 116274 (-)
Type: STP
Location: 115282 - 116274 (-)
Gene ID: A112_contig_2717_109
Type: TF
Location: 116271 - 116942 (-)
Type: TF
Location: 116271 - 116942 (-)
Gene ID: A112_contig_2717_110
Type: TC
Location: 116935 - 118032 (-)
Type: TC
Location: 116935 - 118032 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900753715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.