Cluster: A112.bin_6_CGC42
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: A112.bin_6
- CGC Family ID: CGCFAM_03002
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A112_contig_2717 | A112_contig_2717_241 | 263614 | 264954 | - | GH5_4 |
| CAZyme | A112_contig_2717 | A112_contig_2717_242 | 264956 | 265978 | - | GH130_2 |
| TF | A112_contig_2717 | A112_contig_2717_243 | 266008 | 267030 | - | LacI |
| TC | A112_contig_2717 | A112_contig_2717_244 | 267049 | 267684 | - | 9.B.28.1.2 |
| STP | A112_contig_2717 | A112_contig_2717_245 | 267780 | 269237 | - | SBP_bac_1 |
| pfam | A112_contig_2717 | A112_contig_2717_246 | 269321 | 271234 | - | CBM65_1 | CBM65_1 | CBM65_1 |
| TC | A112_contig_2717 | A112_contig_2717_247 | 271286 | 272296 | - | 3.A.1.1.11 |
Gene ID: A112_contig_2717_241
Type: CAZyme
Location: 263614 - 264954 (-)
Type: CAZyme
Location: 263614 - 264954 (-)
Gene ID: A112_contig_2717_242
Type: CAZyme
Location: 264956 - 265978 (-)
Type: CAZyme
Location: 264956 - 265978 (-)
Gene ID: A112_contig_2717_243
Type: TF
Location: 266008 - 267030 (-)
Type: TF
Location: 266008 - 267030 (-)
Gene ID: A112_contig_2717_244
Type: TC
Location: 267049 - 267684 (-)
Type: TC
Location: 267049 - 267684 (-)
Gene ID: A112_contig_2717_245
Type: STP
Location: 267780 - 269237 (-)
Type: STP
Location: 267780 - 269237 (-)
Gene ID: A112_contig_2717_246
Type: pfam
Location: 269321 - 271234 (-)
Type: pfam
Location: 269321 - 271234 (-)
Gene ID: A112_contig_2717_247
Type: TC
Location: 271286 - 272296 (-)
Type: TC
Location: 271286 - 272296 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900753715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.