Cluster: A112.bin_6_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: A112.bin_6
- CGC Family ID: CGCFAM_00951
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_1164 | A112_contig_1164_237 | 214120 | 215445 | + | 2.A.86.1.8 |
| STP | A112_contig_1164 | A112_contig_1164_238 | 215519 | 218113 | + | TPR_2 |
| CAZyme | A112_contig_1164 | A112_contig_1164_239 | 218141 | 220039 | + | CBM48 | GH13_9 |
| pfam | A112_contig_1164 | A112_contig_1164_240 | 220109 | 223372 | + | DUF6240 | DUF6240 |
| pfam | A112_contig_1164 | A112_contig_1164_241 | 223367 | 224125 | - | Amidase_3 |
| CAZyme | A112_contig_1164 | A112_contig_1164_242 | 224194 | 225978 | - | GH18 |
Gene ID: A112_contig_1164_237
Type: TC
Location: 214120 - 215445 (+)
Type: TC
Location: 214120 - 215445 (+)
Gene ID: A112_contig_1164_238
Type: STP
Location: 215519 - 218113 (+)
Type: STP
Location: 215519 - 218113 (+)
Gene ID: A112_contig_1164_239
Type: CAZyme
Location: 218141 - 220039 (+)
Type: CAZyme
Location: 218141 - 220039 (+)
Gene ID: A112_contig_1164_240
Type: pfam
Location: 220109 - 223372 (+)
Type: pfam
Location: 220109 - 223372 (+)
Gene ID: A112_contig_1164_241
Type: pfam
Location: 223367 - 224125 (-)
Type: pfam
Location: 223367 - 224125 (-)
Gene ID: A112_contig_1164_242
Type: CAZyme
Location: 224194 - 225978 (-)
Type: CAZyme
Location: 224194 - 225978 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900753715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.