CGCs
Total: 123241 Gene Clusters| Cluster ID ↓ | CGC Family | Total Gene Count | CAZyme Gene Count | Substrate | CAZymes | Continent |
|---|---|---|---|---|---|---|
| VatanenT_2016_SRR4305041_bin.1_CGC43 | — | 4 | 2 | — |
GH20
Capsular polysaccharide (bacteria), Mucin, N-glycan (host glycan, human milk oligosaccharides, chitin), Lacto-n-tetraose (human milk oligosaccharides)
GH95
Plant pectic polysaccharide, xylan, Alpha1, 2-l-fucosidase sugar, Alpha-l-fucoside
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC42 | — | 3 | 1 | — |
CBM32
Galactose, lactose, lacnac
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC41 | CGCFAM_00136 | 11 | 4 | pectin |
GH105
Pectin, Pectin (rhamnogalacturonan i), Ulvan
CE8
Pectin
CE12
Pectin, Acetyl xylan
PL1
Pectin, Homogalacturonan(de-esterified pectin)
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC40 | CGCFAM_00001 | 7 | 3 | pectin galactan beta-glucan xylan beta-mannan host glycan |
GH29
Human milk oligosaccharides, mucin, host glycan
GH88
Sulfated glycosaminoglycans
GH95
Plant pectic polysaccharide, xylan, Alpha1, 2-l-fucosidase sugar, Alpha-l-fucoside
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC39 | CGCFAM_00164 | 3 | 1 | — |
PL8
Alginate, Hyaluronan, Glycosaminoglycans(host glycan), Heparin and heparan sulfate(host glycan), Xanthan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC37 | CGCFAM_08666 | 3 | 2 | — |
GT4
GH130
Mannooligosaccharides, Beta-mannan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC36 | — | 4 | 1 | — |
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC35 | CGCFAM_00256 | 5 | 2 | — |
GH125
Alpha-mannan, plant n-glycan
GH76
Alpha-glucose, Yeast alpha-mannan (yeast cell wall)
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC34 | — | 3 | 1 | — |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC33 | — | 4 | 1 | — |
CBM50
Chitin or peptidoglycan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC31 | CGCFAM_01310 | 8 | 3 | — |
GH43
Arabinan, arabinoxylan, Beta-1, 3-galactan, arabinogalactan, Beta-galactofuranoside, 3-xylan (algae), Xylan, Arabinoxylan
GH92
Mannosyl-oligosaccharide, Host n-glycan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC30 | — | 4 | 1 | — |
GT2
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC3 | — | 5 | 1 | — |
CE1
Hydroxycinnamic acids(phenolic acids), Trehalose, Acyl-coa, Palmitoyl-coa and other long-chain acyl-coas(ester), Xylan, Feruloyl-polysaccharide(esterified sugar)
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC28 | CGCFAM_00017 | 10 | 4 | fructan |
GH32
Levan (fructan), Graminan- and levan-type fructans, Fructan(inulin, levan and sucrose), Fructan, Inulin
GH91
Inulin
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC27 | — | 5 | 2 | — |
GH30
Arabinogalactan proteins, Beta-fucosides, Beta-glucan, Beta-1, 6-glucan (fungal and algal cell wall), Glucosylsphingosine, glucosylceramide (host glycans), Xylan
GH130
Mannooligosaccharides, Beta-mannan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC26 | — | 4 | 1 | — |
GH154
Arabinogalactan proteins
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC25 | CGCFAM_00985 | 12 | 6 | — |
GH20
Capsular polysaccharide (bacteria), Mucin, N-glycan (host glycan, human milk oligosaccharides, chitin), Lacto-n-tetraose (human milk oligosaccharides)
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
CE20
Xyloglucan
CBM93
Sialylated and non-sialylated glycans
GH33
Sialic acid, Sialic acid (o-glycan, n-glycan, mucin, host glycan), Pectin (rhamnogalacturonan ii), lipopolysaccharides (bacteria)
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC24 | CGCFAM_09515 | 4 | 1 | — |
GH29
Human milk oligosaccharides, mucin, host glycan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC23 | CGCFAM_01124 | 14 | 6 | — |
GT2
GT4
GT101
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC22 | — | 8 | 5 | — |
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
CBM32
Galactose, lactose, lacnac
GH38
Mannosyl-oligosaccharide
GH35
Beta-galactoside, Chitosan, chitin, Galactan and arabinogalactan
|
Europe |