Cluster: VatanenT_2016_SRR4305041_bin.1_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4305041_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4305041_bin.1_k119_1160 | VatanenT_2016_SRR4305041_bin.1_k119_1160_20 | 22987 | 23808 | - | CE1 |
| pfam | VatanenT_2016_SRR4305041_bin.1_k119_1160 | VatanenT_2016_SRR4305041_bin.1_k119_1160_21 | 23831 | 24265 | - | DUF2007 |
| TC | VatanenT_2016_SRR4305041_bin.1_k119_1160 | VatanenT_2016_SRR4305041_bin.1_k119_1160_22 | 24446 | 26824 | + | 1.B.14.6.5 |
| peptidase | VatanenT_2016_SRR4305041_bin.1_k119_1160 | VatanenT_2016_SRR4305041_bin.1_k119_1160_23 | 26857 | 27642 | + | M48.UPC |
| TC | VatanenT_2016_SRR4305041_bin.1_k119_1160 | VatanenT_2016_SRR4305041_bin.1_k119_1160_24 | 27828 | 29117 | + | 9.A.40.2.2 |
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_1160_20
Type: CAZyme
Location: 22987 - 23808 (-)
Type: CAZyme
Location: 22987 - 23808 (-)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_1160_21
Type: pfam
Location: 23831 - 24265 (-)
Type: pfam
Location: 23831 - 24265 (-)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_1160_22
Type: TC
Location: 24446 - 26824 (+)
Type: TC
Location: 24446 - 26824 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_1160_23
Type: peptidase
Location: 26857 - 27642 (+)
Type: peptidase
Location: 26857 - 27642 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_1160_24
Type: TC
Location: 27828 - 29117 (+)
Type: TC
Location: 27828 - 29117 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900547205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.