Cluster: VatanenT_2016_SRR4305041_bin.1_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: VatanenT_2016_SRR4305041_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | VatanenT_2016_SRR4305041_bin.1_k119_3066 | VatanenT_2016_SRR4305041_bin.1_k119_3066_14 | 13789 | 16827 | + | 1.B.14.6.1 |
| TC | VatanenT_2016_SRR4305041_bin.1_k119_3066 | VatanenT_2016_SRR4305041_bin.1_k119_3066_15 | 16856 | 18550 | + | 8.A.46.1.3 |
| CAZyme | VatanenT_2016_SRR4305041_bin.1_k119_3066 | VatanenT_2016_SRR4305041_bin.1_k119_3066_16 | 18577 | 20148 | + | GH30_6 |
| NULL(UNKNOWN) | VatanenT_2016_SRR4305041_bin.1_k119_3066 | VatanenT_2016_SRR4305041_bin.1_k119_3066_17 | 20168 | 21631 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | VatanenT_2016_SRR4305041_bin.1_k119_3066 | VatanenT_2016_SRR4305041_bin.1_k119_3066_18 | 21712 | 22917 | + | GH130_1 |
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_3066_14
Type: TC
Location: 13789 - 16827 (+)
Type: TC
Location: 13789 - 16827 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_3066_15
Type: TC
Location: 16856 - 18550 (+)
Type: TC
Location: 16856 - 18550 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_3066_16
Type: CAZyme
Location: 18577 - 20148 (+)
Type: CAZyme
Location: 18577 - 20148 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_3066_17
Type:
Location: 20168 - 21631 (+)
Type:
Location: 20168 - 21631 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_3066_18
Type: CAZyme
Location: 21712 - 22917 (+)
Type: CAZyme
Location: 21712 - 22917 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900547205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.