CGCs
Total: 123241 Gene Clusters| Cluster ID ↑ | CGC Family | Total Gene Count | CAZyme Gene Count | Substrate | CAZymes | Continent |
|---|---|---|---|---|---|---|
| SW145_3_CGC25 | CGCFAM_02020 | 5 | 1 | — |
GH3
Arabinan, arabinoxylan, Avenacin, Beta-1, 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan, 3-glucan (laminarin, Cellodextrin (beta-1, 3-glucan), Chitin, peptidoglycan, Glycosphingolipid (host glycan), Peptidoglycan, Coniferin (glucoside of coniferyl alcohol), Protodioscin (plant steroidal saponin), Xylan, Xyloglucan (plant)
|
Africa |
| SW145_3_CGC26 | CGCFAM_02023 | 3 | 1 | — |
GH24
Peptidoglycan
|
Africa |
| SW145_3_CGC27 | CGCFAM_00261 | 5 | 1 | — |
GH23
Chitin, Peptidoglycan
|
Africa |
| SW145_3_CGC28 | — | 7 | 1 | — |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
Africa |
| SW145_3_CGC29 | — | 5 | 2 | — |
CE4
Chitooligosaccharides, Chitin, Peptidoglycan, Acetylxylan
GH153
Deacetylated poly-beta-(1, 6)-n-acetyl-glucosamine (bacterial pnag for biofilm)
GT2
|
Africa |
| SW145_3_CGC3 | — | 4 | 1 | — |
GT2
|
Africa |
| SW145_3_CGC30 | — | 3 | 2 | — |
GH88
Sulfated glycosaminoglycans
GH154
Arabinogalactan proteins
|
Africa |
| SW145_3_CGC31 | — | 9 | 1 | — |
GH23
Chitin, Peptidoglycan
|
Africa |
| SW145_3_CGC33 | — | 3 | 2 | — |
AA10
Cellulose, Chitin, Xylan
CBM73
Chitin
GH20
Capsular polysaccharide (bacteria), Mucin, N-glycan (host glycan, human milk oligosaccharides, chitin), Lacto-n-tetraose (human milk oligosaccharides)
|
Africa |
| SW145_3_CGC35 | — | 11 | 3 | — |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
GH179
Chitin or peptidoglycan
GH65
Kojibiose and alpha-1, 2-oligoglucan, Trehalose, kojibiose, Kojibiose, Nigerose, 1, 3-alpha-oligoglucan, Maltose (alpha-1, 4), Glc-alpha-1, 2-gal of collagen (animal), Glucopyranosyl-alpha-1, 3-rhamnose (bacteria lipopolysaccharides or capsule polysaccharides)
|
Africa |
| SW145_3_CGC36 | — | 5 | 1 | — |
GH32
Levan (fructan), Graminan- and levan-type fructans, Fructan(inulin, levan and sucrose), Fructan, Inulin
|
Africa |
| SW145_3_CGC37 | CGCFAM_03726 | 9 | 3 | — |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
CBM48
Glycogen
|
Africa |
| SW145_3_CGC38 | CGCFAM_00003 | 7 | 2 | — |
GT4
|
Africa |
| SW145_3_CGC39 | — | 4 | 1 | — |
GT4
|
Africa |
| SW145_3_CGC4 | — | 6 | 2 | — |
GH8
Beta-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan (lichenin and cereal beta-glucan), Cellulose, Chitosan, Xylan
GT2
|
Africa |
| SW145_3_CGC41 | — | 3 | 1 | — |
GH19
Chitin, Peptidoglycan
|
Africa |
| SW145_3_CGC42 | — | 5 | 1 | — |
CE9
Host glycan
|
Africa |
| SW145_3_CGC43 | — | 6 | 1 | — |
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
|
Africa |
| SW145_3_CGC44 | — | 8 | 1 | — |
GH103
Peptidoglycan
|
Africa |
| SW145_3_CGC46 | CGCFAM_00434 | 13 | 1 | — |
PL22
Pectin( d-galacturonate)
|
Africa |