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Cluster: SW145_3_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_149305 k141_149305_9 6820 9435 + GT2
TC k141_149305 k141_149305_10 9482 11869 + 4.D.3.1.6
CAZyme k141_149305 k141_149305_11 11876 12982 + GH8
TC k141_149305 k141_149305_12 12964 16446 + 1.B.55.3.1
STP k141_149305 k141_149305_13 16567 18573 + EAL | GGDEF
TC k141_149305 k141_149305_14 18732 20018 + 2.A.23.1.7
Gene ID: k141_149305_9
Type: CAZyme
Location: 6820 - 9435 (+)
Gene ID: k141_149305_10
Type: TC
Location: 9482 - 11869 (+)
Gene ID: k141_149305_11
Type: CAZyme
Location: 11876 - 12982 (+)
Gene ID: k141_149305_12
Type: TC
Location: 12964 - 16446 (+)
Gene ID: k141_149305_13
Type: STP
Location: 16567 - 18573 (+)
Gene ID: k141_149305_14
Type: TC
Location: 18732 - 20018 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_149305_13 vegetarian > omnivore 1.23194 0.02177

🧭 Explore Read Mapping of CGC

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