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Cluster: SW145_3_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_67668 k141_67668_34 30359 31846 + GH13_5
pfam k141_67668 k141_67668_35 32352 32765 - YedD
pfam k141_67668 k141_67668_36 32841 33155 - FliE
TC k141_67668 k141_67668_37 33384 35066 + 3.A.6.2.1
pfam k141_67668 k141_67668_38 35059 36057 + FliG_C | FliG_M | FliG_N
TC k141_67668 k141_67668_39 36050 36757 + 3.A.6.2.1
TC k141_67668 k141_67668_40 36757 38127 + 3.A.6.2.1
Gene ID: k141_67668_34
Type: CAZyme
Location: 30359 - 31846 (+)
Gene ID: k141_67668_35
Type: pfam
Location: 32352 - 32765 (-)
Gene ID: k141_67668_36
Type: pfam
Location: 32841 - 33155 (-)
Gene ID: k141_67668_37
Type: TC
Location: 33384 - 35066 (+)
Gene ID: k141_67668_38
Type: pfam
Location: 35059 - 36057 (+)
Gene ID: k141_67668_39
Type: TC
Location: 36050 - 36757 (+)
Gene ID: k141_67668_40
Type: TC
Location: 36757 - 38127 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_67668_35 vegetarian > vegan 1.40175 0.04464

🧭 Explore Read Mapping of CGC

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