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Cluster: SW145_3_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_119757 k141_119757_119 124554 125942 + GH13_18
TC k141_119757 k141_119757_120 126264 127478 + 3.A.1.1.46
TC k141_119757 k141_119757_121 127577 128458 + 3.A.1.1.46
TC k141_119757 k141_119757_122 128445 129287 + 3.A.1.1.46
pfam k141_119757 k141_119757_123 129316 130368 + ADH_zinc_N
pfam k141_119757 k141_119757_124 130386 131174 + AP_endonuc_2
CAZyme k141_119757 k141_119757_125 131189 132244 + GH179
CAZyme k141_119757 k141_119757_126 132238 134517 + GH65
pfam k141_119757 k141_119757_127 134507 135172 + Hydrolase | HAD_2
TC k141_119757 k141_119757_128 135186 136268 + 3.A.1.1.46
TC k141_119757 k141_119757_129 136335 137249 + 1.B.21.1.1
Gene ID: k141_119757_119
Type: CAZyme
Location: 124554 - 125942 (+)
Gene ID: k141_119757_120
Type: TC
Location: 126264 - 127478 (+)
Gene ID: k141_119757_121
Type: TC
Location: 127577 - 128458 (+)
Gene ID: k141_119757_122
Type: TC
Location: 128445 - 129287 (+)
Gene ID: k141_119757_123
Type: pfam
Location: 129316 - 130368 (+)
Gene ID: k141_119757_124
Type: pfam
Location: 130386 - 131174 (+)
Gene ID: k141_119757_125
Type: CAZyme
Location: 131189 - 132244 (+)
Gene ID: k141_119757_126
Type: CAZyme
Location: 132238 - 134517 (+)
Gene ID: k141_119757_127
Type: pfam
Location: 134507 - 135172 (+)
Gene ID: k141_119757_128
Type: TC
Location: 135186 - 136268 (+)
Gene ID: k141_119757_129
Type: TC
Location: 136335 - 137249 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_119757_120 vegetarian > omnivore 1.04724 0.03328
k141_119757_125 vegetarian > omnivore 2.16376 0.03328
k141_119757_125 vegetarian > vegan 2.08636 0.04335

🧭 Explore Read Mapping of CGC

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