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Cluster: SW145_3_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_92842 k141_92842_2 214 1638 - GH1
TC k141_92842 k141_92842_3 1657 3108 - 4.A.1.2.3
TF k141_92842 k141_92842_4 3323 4336 + LacI
TC k141_92842 k141_92842_5 4470 5015 + 5.A.3.11.1
pfam k141_92842 k141_92842_6 5022 7238 + Acylphosphatase | Sua5_yciO_yrdC | zf-HYPF | zf-HYPF | HypF_C | HypF_C_2
TC k141_92842 k141_92842_7 7240 8262 + 2.A.52.1.1
Gene ID: k141_92842_2
Type: CAZyme
Location: 214 - 1638 (-)
Gene ID: k141_92842_3
Type: TC
Location: 1657 - 3108 (-)
Gene ID: k141_92842_4
Type: TF
Location: 3323 - 4336 (+)
Gene ID: k141_92842_5
Type: TC
Location: 4470 - 5015 (+)
Gene ID: k141_92842_6
Type: pfam
Location: 5022 - 7238 (+)
Gene ID: k141_92842_7
Type: TC
Location: 7240 - 8262 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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