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Cluster: SW145_3_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_61062 k141_61062_27 30326 31345 - GT4
CAZyme k141_61062 k141_61062_28 31342 32499 - GT4
pfam k141_61062 k141_61062_29 32581 33447 - NTP_transferase | NTP_transf_3
pfam k141_61062 k141_61062_30 33450 34532 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC k141_61062 k141_61062_31 34635 36521 - 9.B.18.2.1
pfam k141_61062 k141_61062_32 36560 37120 - PglD_N
TC k141_61062 k141_61062_33 37113 38156 - 9.B.146.1.2
Gene ID: k141_61062_27
Type: CAZyme
Location: 30326 - 31345 (-)
Gene ID: k141_61062_28
Type: CAZyme
Location: 31342 - 32499 (-)
Gene ID: k141_61062_29
Type: pfam
Location: 32581 - 33447 (-)
Gene ID: k141_61062_30
Type: pfam
Location: 33450 - 34532 (-)
Gene ID: k141_61062_31
Type: TC
Location: 34635 - 36521 (-)
Gene ID: k141_61062_32
Type: pfam
Location: 36560 - 37120 (-)
Gene ID: k141_61062_33
Type: TC
Location: 37113 - 38156 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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